Variant report

Variant	rs12306671
Chromosome Location	chr12:11718519-11718520
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs10491980	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs11054355	1.00[ASN][1000 genomes]
rs12296206	1.00[CHB][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs12297330	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs12304175	1.00[JPT][hapmap]
rs12312814	0.84[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs12318942	1.00[CHB][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.86[MEX][hapmap];0.89[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs1641623	1.00[CHB][hapmap];1.00[JPT][hapmap];0.92[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs16934780	1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs16934824	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs16935059	0.83[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs16935084	0.83[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs1795551	1.00[JPT][hapmap]
rs56717408	0.83[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs7316082	0.86[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs73286612	0.83[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs7972959	0.89[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs7975230	1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs7975331	1.00[CHB][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.87[AMR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:11715200-11721800	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
2	chr12:11716000-11721400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
3	chr12:11716800-11721600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
4	chr12:11718400-11718600	Weak transcription	GM12878-XiMat	blood
5	chr12:11718400-11719600	Weak transcription	Aorta	Aorta

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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