The 2.0 version of rSNPBase

Variant report

Variant rs12330670
Chromosome Location chr3:119562761-119562762
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:104 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:119529400-119566600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
2 chr3:119529600-119582000 Weak transcription Spleen Spleen
3 chr3:119536200-119569000 Weak transcription Esophagus oesophagus
4 chr3:119536400-119570200 Weak transcription Sigmoid Colon Sigmoid Colon
5 chr3:119536600-119576000 Weak transcription Fetal Muscle Trunk muscle
6 chr3:119536600-119576400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
7 chr3:119539000-119576400 Weak transcription Ovary ovary
8 chr3:119540400-119563600 Weak transcription Primary T killer memory cells from peripheral blood blood
9 chr3:119540400-119574800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
10 chr3:119540400-119576600 Weak transcription Skeletal Muscle Female skeletal muscle
11 chr3:119540800-119577000 Weak transcription Aorta Aorta
12 chr3:119541000-119581600 Weak transcription Primary T helper naive cells from peripheral blood blood
13 chr3:119541200-119587000 Weak transcription Gastric stomach
14 chr3:119542400-119581200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
15 chr3:119542600-119581600 Weak transcription HUVEC blood vessel
16 chr3:119542800-119575000 Weak transcription Fetal Kidney kidney
17 chr3:119545000-119576400 Weak transcription Rectal Mucosa Donor 31 rectum
18 chr3:119545200-119562800 Weak transcription NHLF lung
19 chr3:119545200-119575000 Weak transcription Breast Myoepithelial Primary Cells Breast
20 chr3:119545200-119575000 Weak transcription Adipose Nuclei Adipose
21 chr3:119545200-119575400 Weak transcription Primary T helper naive cells fromperipheralblood blood
22 chr3:119545200-119583400 Weak transcription Brain Angular Gyrus brain
23 chr3:119545800-119576400 Weak transcription Brain Germinal Matrix brain
24 chr3:119545800-119581600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
25 chr3:119546000-119569000 Weak transcription Duodenum Smooth Muscle Duodenum
26 chr3:119546000-119571800 Weak transcription GM12878-XiMat blood
27 chr3:119546000-119575000 Weak transcription Primary B cells from peripheral blood blood
28 chr3:119546000-119576400 Weak transcription Stomach Smooth Muscle stomach
29 chr3:119546000-119663400 Weak transcription Lung lung
30 chr3:119546200-119569000 Weak transcription Placenta Placenta
31 chr3:119546200-119575000 Weak transcription Duodenum Mucosa Duodenum
32 chr3:119546400-119567000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
33 chr3:119546400-119575200 Weak transcription Liver Liver
34 chr3:119546400-119580400 Weak transcription HepG2 liver
35 chr3:119548600-119576600 Weak transcription HUES48 Cell Line embryonic stem cell
36 chr3:119548600-119581600 Weak transcription H1 Cell Line embryonic stem cell
37 chr3:119548800-119575000 Weak transcription HUES64 Cell Line embryonic stem cell
38 chr3:119549000-119577200 Weak transcription Small Intestine intestine
39 chr3:119549200-119574600 Weak transcription Cortex derived primary cultured neurospheres brain
40 chr3:119549200-119581600 Weak transcription Brain Hippocampus Middle brain
41 chr3:119549600-119575200 Weak transcription Fetal Brain Male brain
42 chr3:119551200-119576200 Weak transcription Muscle Satellite Cultured Cells --
43 chr3:119551200-119576800 Weak transcription ES-I3 Cell Line embryonic stem cell
44 chr3:119551400-119594600 Weak transcription iPS-15b Cell Line embryonic stem cell
45 chr3:119551800-119580600 Weak transcription NH-A brain
46 chr3:119551800-119581400 Weak transcription Osteobl bone
47 chr3:119552000-119575000 Weak transcription HUES6 Cell Line embryonic stem cell
48 chr3:119552000-119575600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
49 chr3:119552200-119576400 Weak transcription A549 lung
50 chr3:119552200-119576600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung

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Last update: Aug 31, 2015