Variant report

Variant rs12336509
Chromosome Location chr9:15501753-15501754
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:15442800-15508400 Strong transcription Fetal Thymus thymus
2 chr9:15447000-15509800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
3 chr9:15449800-15509000 Weak transcription Small Intestine intestine
4 chr9:15454600-15508600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
5 chr9:15460800-15510000 Weak transcription Esophagus oesophagus
6 chr9:15462800-15505200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
7 chr9:15467400-15505600 Weak transcription Skeletal Muscle Male skeletal muscle
8 chr9:15469200-15505600 Weak transcription NHLF lung
9 chr9:15472200-15509000 Weak transcription HMEC breast
10 chr9:15476400-15504000 Weak transcription Skeletal Muscle Female skeletal muscle
11 chr9:15476600-15508800 Weak transcription Rectal Smooth Muscle rectum
12 chr9:15476600-15510000 Weak transcription Sigmoid Colon Sigmoid Colon
13 chr9:15477000-15504800 Weak transcription HSMM muscle
14 chr9:15477000-15509600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
15 chr9:15478000-15505000 Weak transcription Adipose Nuclei Adipose
16 chr9:15480200-15505200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
17 chr9:15481600-15509600 Weak transcription Aorta Aorta
18 chr9:15483000-15504800 Weak transcription Brain Hippocampus Middle brain
19 chr9:15483000-15504800 Weak transcription Brain Substantia Nigra brain
20 chr9:15485800-15509800 Weak transcription ES-WA7 Cell Line embryonic stem cell
21 chr9:15486000-15505000 Weak transcription Rectal Mucosa Donor 31 rectum
22 chr9:15486400-15505800 Weak transcription Muscle Satellite Cultured Cells --
23 chr9:15486600-15504000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
24 chr9:15486800-15505600 Weak transcription K562 blood
25 chr9:15488600-15502000 Weak transcription Brain Cingulate Gyrus brain
26 chr9:15488800-15505400 Weak transcription NHDF-Ad bronchial
27 chr9:15492600-15502000 Weak transcription Liver Liver
28 chr9:15492600-15508200 Weak transcription Brain Angular Gyrus brain
29 chr9:15492600-15509800 Weak transcription Colonic Mucosa Colon
30 chr9:15492800-15505800 Weak transcription Fetal Brain Male brain
31 chr9:15493000-15501800 Weak transcription Left Ventricle heart
32 chr9:15493000-15502200 Weak transcription Cortex derived primary cultured neurospheres brain
33 chr9:15493000-15502200 Weak transcription Brain Inferior Temporal Lobe brain
34 chr9:15493000-15502200 Weak transcription Duodenum Mucosa Duodenum
35 chr9:15493000-15502200 Weak transcription Hela-S3 cervix
36 chr9:15493000-15504400 Weak transcription Duodenum Smooth Muscle Duodenum
37 chr9:15493000-15504600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
38 chr9:15493000-15504800 Weak transcription HepG2 liver
39 chr9:15493000-15506800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
40 chr9:15493000-15507800 Strong transcription H1 Cell Line embryonic stem cell
41 chr9:15493000-15509800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
42 chr9:15493000-15510000 Weak transcription Gastric stomach
43 chr9:15493000-15510000 Weak transcription Lung lung
44 chr9:15493000-15510000 Weak transcription Pancreas Pancrea
45 chr9:15493000-15510000 Weak transcription Spleen Spleen
46 chr9:15493200-15505800 Weak transcription Brain Anterior Caudate brain
47 chr9:15493200-15509000 Weak transcription Ovary ovary
48 chr9:15493200-15509600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
49 chr9:15493400-15501800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
50 chr9:15493400-15510000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived

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