Variant report

Variant rs12337439
Chromosome Location chr9:591755-591756
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:52 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:549800-593800 Weak transcription Lung lung
2 chr9:583000-594400 Weak transcription Fetal Kidney kidney
3 chr9:589000-592000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
4 chr9:589200-591800 Enhancers Cortex derived primary cultured neurospheres brain
5 chr9:589200-592600 Enhancers Brain Anterior Caudate brain
6 chr9:589400-592800 Enhancers HMEC breast
7 chr9:589400-593400 Enhancers A549 lung
8 chr9:589800-593000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
9 chr9:590000-592000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
10 chr9:590000-625000 Weak transcription Aorta Aorta
11 chr9:590200-591800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
12 chr9:590200-591800 Weak transcription Duodenum Smooth Muscle Duodenum
13 chr9:590200-591800 Enhancers Fetal Heart heart
14 chr9:590200-592000 Weak transcription H1 Cell Line embryonic stem cell
15 chr9:590200-592000 Weak transcription HUES48 Cell Line embryonic stem cell
16 chr9:590200-592000 Weak transcription HUES64 Cell Line embryonic stem cell
17 chr9:590200-592000 Weak transcription Right Ventricle heart
18 chr9:590200-593000 Enhancers Breast Myoepithelial Primary Cells Breast
19 chr9:590200-600200 Weak transcription Placenta Placenta
20 chr9:590200-621600 Weak transcription Psoas Muscle Psoas
21 chr9:590400-592600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
22 chr9:590400-593000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
23 chr9:591000-592200 Enhancers Fetal Intestine Small intestine
24 chr9:591400-591800 Flanking Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
25 chr9:591400-591800 Enhancers Skeletal Muscle Male skeletal muscle
26 chr9:591400-591800 Enhancers Skeletal Muscle Female skeletal muscle
27 chr9:591400-591800 Flanking Active TSS NHEK skin
28 chr9:591400-592200 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
29 chr9:591400-592200 Enhancers Gastric stomach
30 chr9:591400-592200 Enhancers Rectal Mucosa Donor 31 rectum
31 chr9:591400-592200 Enhancers Sigmoid Colon Sigmoid Colon
32 chr9:591400-592400 Enhancers Brain Angular Gyrus brain
33 chr9:591400-592400 Enhancers Esophagus oesophagus
34 chr9:591400-592600 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
35 chr9:591400-592600 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
36 chr9:591400-592600 Enhancers HUES6 Cell Line embryonic stem cell
37 chr9:591400-592600 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
38 chr9:591400-592600 Enhancers Brain Inferior Temporal Lobe brain
39 chr9:591400-592600 Enhancers Brain Substantia Nigra brain
40 chr9:591400-592600 Enhancers Fetal Intestine Large intestine
41 chr9:591400-592600 Enhancers Left Ventricle heart
42 chr9:591400-592600 Enhancers Pancreas Pancrea
43 chr9:591400-593000 Enhancers Brain Hippocampus Middle brain
44 chr9:591400-593000 Enhancers Right Atrium heart
45 chr9:591400-593000 Enhancers Stomach Mucosa stomach
46 chr9:591400-594200 Enhancers iPS-18 Cell Line embryonic stem cell
47 chr9:591400-601600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
48 chr9:591600-591800 Enhancers ES-UCSF4 Cell Line embryonic stem cell
49 chr9:591600-591800 Enhancers Fetal Lung lung
50 chr9:591600-592000 Enhancers Duodenum Mucosa Duodenum

Quick Search:


  
Input of quick search could be:

what's new

Quick links