Variant report

Variant rs12345892
Chromosome Location chr9:518103-518104
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:44 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:506000-520000 Weak transcription Aorta Aorta
2 chr9:506000-520200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr9:506400-519600 Weak transcription Colon Smooth Muscle Colon
4 chr9:507000-532600 Weak transcription ES-I3 Cell Line embryonic stem cell
5 chr9:508400-522400 Weak transcription Fetal Muscle Leg muscle
6 chr9:511600-518200 Weak transcription A549 lung
7 chr9:512200-518400 Weak transcription Small Intestine intestine
8 chr9:512400-522400 Weak transcription Right Ventricle heart
9 chr9:513200-518200 Weak transcription Rectal Mucosa Donor 31 rectum
10 chr9:513400-520800 Weak transcription Fetal Lung lung
11 chr9:513400-521000 Weak transcription Brain Substantia Nigra brain
12 chr9:513400-522400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
13 chr9:513600-522800 Weak transcription Brain Cingulate Gyrus brain
14 chr9:514000-532200 Weak transcription Fetal Muscle Trunk muscle
15 chr9:514400-518400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
16 chr9:514600-518400 Enhancers Primary T helper naive cells fromperipheralblood blood
17 chr9:514800-519400 Enhancers Primary T killer memory cells from peripheral blood blood
18 chr9:515800-518400 Enhancers Primary T helper cells fromperipheralblood blood
19 chr9:516000-521400 Enhancers Primary T helper cells PMA-I stimulated --
20 chr9:516200-518400 Enhancers Primary T helper naive cells from peripheral blood blood
21 chr9:516200-520800 Enhancers Breast Myoepithelial Primary Cells Breast
22 chr9:516600-518200 Weak transcription Duodenum Mucosa Duodenum
23 chr9:516600-518200 Weak transcription Fetal Heart heart
24 chr9:516600-518800 Enhancers Left Ventricle heart
25 chr9:516800-518800 Enhancers Pancreas Pancrea
26 chr9:517000-522400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
27 chr9:517400-518200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
28 chr9:517400-518400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
29 chr9:517400-520600 Weak transcription Brain Inferior Temporal Lobe brain
30 chr9:517400-522200 Weak transcription Cortex derived primary cultured neurospheres brain
31 chr9:517600-518400 Weak transcription Brain Anterior Caudate brain
32 chr9:517600-518600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
33 chr9:517600-519000 Enhancers Fetal Intestine Small intestine
34 chr9:517600-519400 Enhancers Fetal Intestine Large intestine
35 chr9:517600-520800 Weak transcription Brain Hippocampus Middle brain
36 chr9:517800-518200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
37 chr9:517800-520000 Enhancers Primary T cells from cord blood blood
38 chr9:518000-518200 Enhancers Stomach Mucosa stomach
39 chr9:518000-518600 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
40 chr9:518000-518600 Enhancers Sigmoid Colon Sigmoid Colon
41 chr9:518000-518600 Flanking Active TSS NHEK skin
42 chr9:518000-518800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
43 chr9:518000-522000 Weak transcription Colonic Mucosa Colon
44 chr9:518000-522400 Weak transcription Lung lung

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