Variant report

Variant rs12346241
Chromosome Location chr9:621357-621358
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:51 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:590000-625000 Weak transcription Aorta Aorta
2 chr9:590200-621600 Weak transcription Psoas Muscle Psoas
3 chr9:606000-628200 Weak transcription H9 Cell Line embryonic stem cell
4 chr9:614400-630800 Weak transcription A549 lung
5 chr9:614600-621600 Weak transcription Fetal Kidney kidney
6 chr9:614600-625800 Weak transcription ES-I3 Cell Line embryonic stem cell
7 chr9:614800-621400 Weak transcription Adipose Nuclei Adipose
8 chr9:614800-621400 Weak transcription Skeletal Muscle Male skeletal muscle
9 chr9:614800-621600 Weak transcription Fetal Muscle Leg muscle
10 chr9:614800-621600 Weak transcription Gastric stomach
11 chr9:614800-627000 Weak transcription Fetal Intestine Small intestine
12 chr9:614800-631400 Weak transcription Esophagus oesophagus
13 chr9:615200-625800 Weak transcription Placenta Placenta
14 chr9:616800-655800 Weak transcription Pancreas Pancrea
15 chr9:617000-626000 Weak transcription Stomach Mucosa stomach
16 chr9:617000-628000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
17 chr9:617000-631000 Weak transcription HMEC breast
18 chr9:617800-621600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
19 chr9:617800-622200 Weak transcription Rectal Mucosa Donor 31 rectum
20 chr9:617800-626200 Weak transcription Right Atrium heart
21 chr9:618000-621400 Weak transcription Stomach Smooth Muscle stomach
22 chr9:618000-621400 Weak transcription HSMMtube muscle
23 chr9:618000-624800 Weak transcription Cortex derived primary cultured neurospheres brain
24 chr9:618400-621600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
25 chr9:618400-621600 Weak transcription Left Ventricle heart
26 chr9:618800-626600 Weak transcription HSMM muscle
27 chr9:619200-624800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
28 chr9:619400-625000 Weak transcription Rectal Smooth Muscle rectum
29 chr9:619400-626800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
30 chr9:619400-630800 Weak transcription NHEK skin
31 chr9:619600-621600 Weak transcription Breast Myoepithelial Primary Cells Breast
32 chr9:619600-621600 Weak transcription Brain Cingulate Gyrus brain
33 chr9:619600-621600 Weak transcription Brain Hippocampus Middle brain
34 chr9:619600-624800 Weak transcription Brain Substantia Nigra brain
35 chr9:619600-630800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
36 chr9:619800-623800 Weak transcription Placenta Amnion Placenta Amnion
37 chr9:619800-624800 Weak transcription Brain Inferior Temporal Lobe brain
38 chr9:619800-625800 Weak transcription NHDF-Ad bronchial
39 chr9:621000-621400 Flanking Active TSS Monocytes-CD14+_RO01746 blood
40 chr9:621000-621800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
41 chr9:621000-621800 Enhancers Liver Liver
42 chr9:621000-621800 Enhancers Brain Anterior Caudate brain
43 chr9:621000-622000 Enhancers Muscle Satellite Cultured Cells --
44 chr9:621000-622000 Enhancers HepG2 liver
45 chr9:621000-622400 Enhancers Primary monocytes fromperipheralblood blood
46 chr9:621000-622400 Enhancers Duodenum Mucosa Duodenum
47 chr9:621200-621400 Enhancers Brain Dorsolateral Prefrontal Cortex brain
48 chr9:621200-621800 Enhancers Colon Smooth Muscle Colon
49 chr9:621200-621800 Enhancers Skeletal Muscle Female skeletal muscle
50 chr9:621200-621800 Enhancers Osteobl bone

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