The 2.0 version of rSNPBase

Variant report

Variant rs12350062
Chromosome Location chr9:15492720-15492721
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:119 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:15442800-15508400 Strong transcription Fetal Thymus thymus
2 chr9:15444400-15495200 Weak transcription Fetal Heart heart
3 chr9:15447000-15509800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
4 chr9:15449800-15509000 Weak transcription Small Intestine intestine
5 chr9:15454600-15508600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
6 chr9:15460800-15510000 Weak transcription Esophagus oesophagus
7 chr9:15461600-15492800 Weak transcription Pancreas Pancrea
8 chr9:15462800-15505200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
9 chr9:15467200-15501000 Weak transcription Colon Smooth Muscle Colon
10 chr9:15467400-15505600 Weak transcription Skeletal Muscle Male skeletal muscle
11 chr9:15469200-15505600 Weak transcription NHLF lung
12 chr9:15472200-15509000 Weak transcription HMEC breast
13 chr9:15476400-15504000 Weak transcription Skeletal Muscle Female skeletal muscle
14 chr9:15476600-15508800 Weak transcription Rectal Smooth Muscle rectum
15 chr9:15476600-15510000 Weak transcription Sigmoid Colon Sigmoid Colon
16 chr9:15477000-15504800 Weak transcription HSMM muscle
17 chr9:15477000-15509600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
18 chr9:15477800-15498200 Weak transcription Placenta Placenta
19 chr9:15478000-15505000 Weak transcription Adipose Nuclei Adipose
20 chr9:15480200-15505200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
21 chr9:15481600-15509600 Weak transcription Aorta Aorta
22 chr9:15482600-15494200 Strong transcription Dnd41 blood
23 chr9:15482600-15501000 Weak transcription Primary T killer memory cells from peripheral blood blood
24 chr9:15483000-15493800 Strong transcription Primary T cells from cord blood blood
25 chr9:15483000-15504800 Weak transcription Brain Hippocampus Middle brain
26 chr9:15483000-15504800 Weak transcription Brain Substantia Nigra brain
27 chr9:15483200-15496000 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
28 chr9:15483400-15494800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
29 chr9:15485200-15499200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
30 chr9:15485800-15501000 Weak transcription HUVEC blood vessel
31 chr9:15485800-15509800 Weak transcription ES-WA7 Cell Line embryonic stem cell
32 chr9:15486000-15505000 Weak transcription Rectal Mucosa Donor 31 rectum
33 chr9:15486200-15495000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
34 chr9:15486200-15501600 Weak transcription Rectal Mucosa Donor 29 rectum
35 chr9:15486400-15505800 Weak transcription Muscle Satellite Cultured Cells --
36 chr9:15486600-15495000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
37 chr9:15486600-15495000 Weak transcription Osteobl bone
38 chr9:15486600-15499000 Weak transcription NH-A brain
39 chr9:15486600-15504000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
40 chr9:15486800-15505600 Weak transcription K562 blood
41 chr9:15487400-15492800 Weak transcription Fetal Intestine Large intestine
42 chr9:15487600-15492800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
43 chr9:15488600-15501000 Weak transcription Primary monocytes fromperipheralblood blood
44 chr9:15488600-15502000 Weak transcription Brain Cingulate Gyrus brain
45 chr9:15488800-15495600 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
46 chr9:15488800-15505400 Weak transcription NHDF-Ad bronchial
47 chr9:15489800-15494000 Strong transcription A549 lung
48 chr9:15490600-15497200 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
49 chr9:15491000-15494000 Strong transcription Fetal Lung lung
50 chr9:15491000-15497400 ZNF genes & repeats GM12878-XiMat blood

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Last update: Aug 31, 2015