Variant report

Variant	rs12373178
Chromosome Location	chr18:30345782-30345783
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs11663493	0.94[ASN][1000 genomes]
rs12606442	0.81[EUR][1000 genomes]
rs12956058	0.86[ASN][1000 genomes]
rs1403750	0.82[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs1523577	0.81[EUR][1000 genomes]
rs2140445	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.83[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs55737004	0.96[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs71366355	0.87[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs715401	1.00[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap];0.86[ASN][1000 genomes]
rs7229257	0.83[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs7234579	0.83[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs749676	1.00[JPT][hapmap]
rs8097174	0.93[CEU][hapmap];1.00[JPT][hapmap];0.81[EUR][1000 genomes]

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr18:30341800-30347200	Enhancers	Primary B cells from cord blood	blood
2	chr18:30342200-30347400	Weak transcription	iPS-18 Cell Line	embryonic stem cell
3	chr18:30343000-30346200	Enhancers	HepG2	liver
4	chr18:30343800-30348200	Weak transcription	Fetal Brain Male	brain
5	chr18:30344000-30347400	Weak transcription	Primary B cells from peripheral blood	blood
6	chr18:30344200-30348800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
7	chr18:30345400-30347400	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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