Variant report

Variant rs12404806
Chromosome Location chr1:92744622-92744623
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:92707200-92764000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr1:92709000-92762800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
3 chr1:92710000-92745200 Weak transcription Brain Hippocampus Middle brain
4 chr1:92710600-92753200 Weak transcription Small Intestine intestine
5 chr1:92710600-92762000 Weak transcription Fetal Brain Male brain
6 chr1:92710600-92763400 Weak transcription Brain Angular Gyrus brain
7 chr1:92710600-92764000 Weak transcription Gastric stomach
8 chr1:92711000-92763600 Weak transcription HSMMtube muscle
9 chr1:92711200-92761600 Weak transcription Skeletal Muscle Male skeletal muscle
10 chr1:92711200-92764000 Weak transcription Spleen Spleen
11 chr1:92719400-92745000 Weak transcription Esophagus oesophagus
12 chr1:92719400-92764000 Weak transcription Pancreas Pancrea
13 chr1:92719600-92760800 Weak transcription Fetal Heart heart
14 chr1:92720000-92763800 Weak transcription Rectal Smooth Muscle rectum
15 chr1:92720400-92748400 Weak transcription Pancreatic Islets Pancreatic Islet
16 chr1:92722400-92763400 Weak transcription iPS-15b Cell Line embryonic stem cell
17 chr1:92723000-92763800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
18 chr1:92724000-92760600 Weak transcription Colon Smooth Muscle Colon
19 chr1:92724200-92745000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
20 chr1:92724200-92746200 Strong transcription Monocytes-CD14+_RO01746 blood
21 chr1:92724200-92746400 Strong transcription Dnd41 blood
22 chr1:92724400-92746400 Strong transcription HUES64 Cell Line embryonic stem cell
23 chr1:92724400-92746600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
24 chr1:92724600-92763800 Weak transcription Brain Substantia Nigra brain
25 chr1:92724800-92747400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
26 chr1:92725800-92764000 Weak transcription Colonic Mucosa Colon
27 chr1:92726800-92746400 Strong transcription iPS-20b Cell Line embryonic stem cell
28 chr1:92727000-92763800 Weak transcription Right Ventricle heart
29 chr1:92727200-92745200 Weak transcription Lung lung
30 chr1:92727200-92759200 Weak transcription A549 lung
31 chr1:92727200-92763800 Weak transcription Brain Cingulate Gyrus brain
32 chr1:92729800-92763800 Weak transcription Brain Inferior Temporal Lobe brain
33 chr1:92731400-92745000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
34 chr1:92731400-92751200 Weak transcription GM12878-XiMat blood
35 chr1:92732000-92750800 Weak transcription Fetal Kidney kidney
36 chr1:92732000-92763600 Weak transcription Primary T killer naive cells fromperipheralblood blood
37 chr1:92732600-92745000 Strong transcription Primary hematopoietic stem cells short term culture blood
38 chr1:92733000-92749200 Strong transcription Fetal Thymus thymus
39 chr1:92733600-92754800 Weak transcription HMEC breast
40 chr1:92735200-92752400 Weak transcription Psoas Muscle Psoas
41 chr1:92736000-92763600 Weak transcription Liver Liver
42 chr1:92736200-92746400 Strong transcription Primary T cells from cord blood blood
43 chr1:92736800-92745400 Weak transcription Skeletal Muscle Female skeletal muscle
44 chr1:92736800-92763800 Weak transcription H9 Cell Line embryonic stem cell
45 chr1:92737000-92746400 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
46 chr1:92737200-92747400 Strong transcription Fetal Muscle Trunk muscle
47 chr1:92737800-92759400 Weak transcription Primary T killer memory cells from peripheral blood blood
48 chr1:92738000-92760600 Weak transcription Hela-S3 cervix
49 chr1:92738000-92763800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
50 chr1:92738400-92752200 Weak transcription ES-I3 Cell Line embryonic stem cell

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