The 2.0 version of rSNPBase

Variant report

Variant rs12419471
Chromosome Location chr11:9793537-9793538
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:76 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:9780600-9813200 Weak transcription Small Intestine intestine
2 chr11:9780800-9794200 Enhancers Fetal Muscle Leg muscle
3 chr11:9781400-9795200 Weak transcription Monocytes-CD14+_RO01746 blood
4 chr11:9781400-9800800 Weak transcription Fetal Brain Female brain
5 chr11:9781600-9798200 Weak transcription Primary monocytes fromperipheralblood blood
6 chr11:9781600-9801000 Weak transcription Primary T cells from cord blood blood
7 chr11:9781600-9809000 Weak transcription Fetal Brain Male brain
8 chr11:9781800-9799200 Weak transcription Primary B cells from cord blood blood
9 chr11:9781800-9799200 Weak transcription Primary hematopoietic stem cells blood
10 chr11:9781800-9801200 Weak transcription Duodenum Mucosa Duodenum
11 chr11:9781800-9801600 Weak transcription Primary B cells from peripheral blood blood
12 chr11:9782000-9798000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
13 chr11:9782200-9796200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
14 chr11:9782400-9799400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
15 chr11:9782600-9797800 Weak transcription Cortex derived primary cultured neurospheres brain
16 chr11:9784000-9797200 Weak transcription Sigmoid Colon Sigmoid Colon
17 chr11:9784000-9801200 Weak transcription Gastric stomach
18 chr11:9784400-9797000 Weak transcription Rectal Mucosa Donor 31 rectum
19 chr11:9787400-9796200 Weak transcription Esophagus oesophagus
20 chr11:9787400-9796200 Weak transcription Psoas Muscle Psoas
21 chr11:9787400-9796800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
22 chr11:9787400-9799000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
23 chr11:9787400-9801000 Weak transcription Aorta Aorta
24 chr11:9787600-9796000 Weak transcription Hela-S3 cervix
25 chr11:9787600-9797600 Weak transcription Fetal Intestine Large intestine
26 chr11:9787600-9799200 Weak transcription H9 Cell Line embryonic stem cell
27 chr11:9787600-9799200 Weak transcription Fetal Lung lung
28 chr11:9787800-9795800 Weak transcription Placenta Amnion Placenta Amnion
29 chr11:9787800-9796200 Weak transcription Stomach Smooth Muscle stomach
30 chr11:9787800-9801000 Weak transcription Rectal Mucosa Donor 29 rectum
31 chr11:9787800-9805200 Weak transcription Colonic Mucosa Colon
32 chr11:9788000-9796000 Weak transcription Ovary ovary
33 chr11:9788000-9796200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
34 chr11:9788000-9796200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
35 chr11:9788000-9796200 Weak transcription Right Atrium heart
36 chr11:9788000-9796600 Weak transcription Pancreas Pancrea
37 chr11:9788000-9801000 Weak transcription Lung lung
38 chr11:9788200-9795400 Weak transcription Osteobl bone
39 chr11:9788200-9796200 Weak transcription HUES6 Cell Line embryonic stem cell
40 chr11:9788200-9796200 Weak transcription Right Ventricle heart
41 chr11:9788200-9801000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
42 chr11:9788400-9795800 Weak transcription Muscle Satellite Cultured Cells --
43 chr11:9788600-9796600 Weak transcription Fetal Heart heart
44 chr11:9788600-9801600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
45 chr11:9788800-9796000 Weak transcription NHEK skin
46 chr11:9788800-9799000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
47 chr11:9789200-9796000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
48 chr11:9789200-9796000 Weak transcription Left Ventricle heart
49 chr11:9789200-9796200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
50 chr11:9789200-9801000 Weak transcription Spleen Spleen

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Last update: Aug 31, 2015