Variant report
| Variant | rs12423741 |
|---|---|
| Chromosome Location | chr12:10872827-10872828 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:10849600-10873600 | Weak transcription | Brain Angular Gyrus | brain |
| 2 | chr12:10850000-10873800 | Weak transcription | Fetal Brain Male | brain |
| 3 | chr12:10852400-10873600 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 4 | chr12:10854800-10873600 | Weak transcription | Brain Cingulate Gyrus | brain |
| 5 | chr12:10862800-10873600 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 6 | chr12:10862800-10874400 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 7 | chr12:10862800-10874600 | Weak transcription | Spleen | Spleen |
| 8 | chr12:10863400-10873600 | Weak transcription | Colonic Mucosa | Colon |
| 9 | chr12:10863400-10873600 | Weak transcription | Lung | lung |
| 10 | chr12:10863400-10874200 | Weak transcription | Gastric | stomach |
| 11 | chr12:10866000-10874200 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 12 | chr12:10867000-10873600 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 13 | chr12:10868600-10874400 | Flanking Active TSS | HUVEC | blood vessel |
| 14 | chr12:10868800-10873600 | Weak transcription | Primary T helper naive cells from peripheral blood | blood |
| 15 | chr12:10868800-10873800 | Enhancers | Placenta Amnion | Placenta Amnion |
| 16 | chr12:10869000-10873000 | Weak transcription | Thymus | Thymus |
| 17 | chr12:10869000-10873400 | Weak transcription | Primary T cells from cord blood | blood |
| 18 | chr12:10869000-10873600 | Enhancers | Rectal Smooth Muscle | rectum |
| 19 | chr12:10869000-10874600 | Flanking Active TSS | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 20 | chr12:10869200-10873000 | Weak transcription | Primary B cells from peripheral blood | blood |
| 21 | chr12:10869400-10873400 | Enhancers | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 22 | chr12:10869400-10873600 | Enhancers | Stomach Mucosa | stomach |
| 23 | chr12:10869400-10873800 | Enhancers | Rectal Mucosa Donor 31 | rectum |
| 24 | chr12:10869600-10874000 | Flanking Active TSS | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 25 | chr12:10870000-10873000 | Weak transcription | Liver | Liver |
| 26 | chr12:10870000-10873200 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 27 | chr12:10870200-10873800 | Enhancers | Fetal Heart | heart |
| 28 | chr12:10870400-10873000 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 29 | chr12:10870400-10873000 | Weak transcription | Fetal Intestine Large | intestine |
| 30 | chr12:10870400-10873000 | Weak transcription | Monocytes-CD14+_RO01746 | blood |
| 31 | chr12:10870400-10873400 | Enhancers | Colon Smooth Muscle | Colon |
| 32 | chr12:10870400-10873600 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 33 | chr12:10870400-10873600 | Weak transcription | Placenta | Placenta |
| 34 | chr12:10870400-10877000 | Active TSS | Psoas Muscle | Psoas |
| 35 | chr12:10871000-10873000 | Weak transcription | Primary monocytes fromperipheralblood | blood |
| 36 | chr12:10871000-10873400 | Enhancers | Fetal Adrenal Gland | Adrenal Gland |
| 37 | chr12:10871200-10873600 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 38 | chr12:10871200-10873600 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 39 | chr12:10871200-10873600 | Weak transcription | Fetal Muscle Trunk | muscle |
| 40 | chr12:10871200-10873600 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 41 | chr12:10871200-10873800 | Weak transcription | Fetal Stomach | stomach |
| 42 | chr12:10871200-10876400 | Active TSS | Skeletal Muscle Male | skeletal muscle |
| 43 | chr12:10871400-10873000 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 44 | chr12:10871400-10873000 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 45 | chr12:10871400-10873000 | Weak transcription | Aorta | Aorta |
| 46 | chr12:10871400-10873000 | Weak transcription | Fetal Thymus | thymus |
| 47 | chr12:10871400-10873000 | Weak transcription | Pancreas | Pancrea |
| 48 | chr12:10871400-10873000 | Active TSS | GM12878-XiMat | blood |
| 49 | chr12:10871400-10873000 | Enhancers | HepG2 | liver |
| 50 | chr12:10871400-10873400 | Enhancers | NH-A | brain |
