Variant report

Variant	rs12463619
Chromosome Location	chr2:37614181-37614182
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs13003908	0.85[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv430724	chr2:37546820-37628704	Weak transcription Flanking Active TSS Active TSS Enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:22 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:37604600-37616800	Weak transcription	Adipose Nuclei	Adipose
2	chr2:37605800-37614200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr2:37606000-37614200	Weak transcription	NHLF	lung
4	chr2:37607400-37614200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
5	chr2:37607400-37618200	Weak transcription	Right Atrium	heart
6	chr2:37607600-37614600	Weak transcription	Rectal Smooth Muscle	rectum
7	chr2:37609200-37615200	Weak transcription	Primary B cells from peripheral blood	blood
8	chr2:37609200-37616600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
9	chr2:37609200-37616800	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
10	chr2:37611400-37615600	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
11	chr2:37611800-37614200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
12	chr2:37611800-37616800	Weak transcription	Skeletal Muscle Male	skeletal muscle
13	chr2:37612000-37614400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
14	chr2:37612200-37616600	Weak transcription	HUES6 Cell Line	embryonic stem cell
15	chr2:37613600-37614400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
16	chr2:37613600-37618400	Enhancers	NHDF-Ad	bronchial
17	chr2:37613800-37614400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
18	chr2:37613800-37614400	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
19	chr2:37613800-37614400	Enhancers	HSMMtube	muscle
20	chr2:37613800-37614400	Enhancers	Osteobl	bone
21	chr2:37613800-37617200	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
22	chr2:37614000-37617400	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin

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