The 2.0 version of rSNPBase

Variant report

Variant rs12475217
Chromosome Location chr2:128241352-128241353
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:128223600-128268800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr2:128224000-128241800 Weak transcription Small Intestine intestine
3 chr2:128226200-128244000 Weak transcription Psoas Muscle Psoas
4 chr2:128229000-128257000 Weak transcription Stomach Mucosa stomach
5 chr2:128234000-128242600 Weak transcription Placenta Amnion Placenta Amnion
6 chr2:128235200-128270000 Strong transcription Dnd41 blood
7 chr2:128237200-128242800 Strong transcription Primary T helper cells PMA-I stimulated --
8 chr2:128237200-128243400 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
9 chr2:128237200-128244000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
10 chr2:128237400-128241400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
11 chr2:128237400-128243000 Strong transcription Primary neutrophils fromperipheralblood blood
12 chr2:128237400-128252400 Strong transcription Fetal Muscle Trunk muscle
13 chr2:128237400-128262400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
14 chr2:128237600-128241800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
15 chr2:128237600-128242400 Strong transcription Primary T cells fromperipheralblood blood
16 chr2:128237600-128242400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
17 chr2:128237600-128242800 Strong transcription Primary T cells from cord blood blood
18 chr2:128237600-128242800 Strong transcription Primary T helper naive cells fromperipheralblood blood
19 chr2:128237600-128242800 Strong transcription Primary T helper cells fromperipheralblood blood
20 chr2:128237600-128242800 Strong transcription Primary T regulatory cells fromperipheralblood blood
21 chr2:128237600-128242800 Strong transcription Primary mononuclear cells fromperipheralblood Blood
22 chr2:128237600-128243000 Strong transcription Primary B cells from peripheral blood blood
23 chr2:128237600-128243400 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
24 chr2:128237600-128243600 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
25 chr2:128237600-128243800 Strong transcription Duodenum Mucosa Duodenum
26 chr2:128237600-128243800 Strong transcription Osteobl bone
27 chr2:128237600-128244000 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
28 chr2:128237600-128244600 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
29 chr2:128237600-128244800 Strong transcription Esophagus oesophagus
30 chr2:128237600-128246600 Strong transcription Fetal Stomach stomach
31 chr2:128237600-128247200 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
32 chr2:128237600-128247600 Strong transcription Thymus Thymus
33 chr2:128237600-128248000 Strong transcription Fetal Intestine Large intestine
34 chr2:128237600-128251400 Strong transcription Rectal Smooth Muscle rectum
35 chr2:128237600-128252200 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
36 chr2:128237600-128252200 Strong transcription Sigmoid Colon Sigmoid Colon
37 chr2:128237600-128255000 Strong transcription Fetal Muscle Leg muscle
38 chr2:128237600-128255200 Strong transcription Rectal Mucosa Donor 31 rectum
39 chr2:128237600-128255400 Strong transcription Cortex derived primary cultured neurospheres brain
40 chr2:128237600-128256000 Strong transcription Duodenum Smooth Muscle Duodenum
41 chr2:128237600-128256200 Strong transcription HepG2 liver
42 chr2:128237600-128263200 Strong transcription Adipose Nuclei Adipose
43 chr2:128237600-128263200 Strong transcription Rectal Mucosa Donor 29 rectum
44 chr2:128237600-128263400 Strong transcription Fetal Adrenal Gland Adrenal Gland
45 chr2:128237600-128263400 Strong transcription Fetal Thymus thymus
46 chr2:128237800-128242800 Strong transcription Primary monocytes fromperipheralblood blood
47 chr2:128237800-128242800 Strong transcription Monocytes-CD14+_RO01746 blood
48 chr2:128237800-128243400 Strong transcription Primary B cells from cord blood blood
49 chr2:128237800-128243400 Strong transcription Lung lung
50 chr2:128237800-128248600 Strong transcription Colonic Mucosa Colon

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Last update: Aug 31, 2015