The 2.0 version of rSNPBase

Variant report

Variant rs12479178
Chromosome Location chr2:148946367-148946368
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:148913000-148977600 Weak transcription Aorta Aorta
2 chr2:148924400-148946400 Weak transcription HSMMtube muscle
3 chr2:148924600-148946800 Weak transcription Rectal Smooth Muscle rectum
4 chr2:148925200-148959000 Weak transcription Brain Hippocampus Middle brain
5 chr2:148928600-148993600 Weak transcription HSMM muscle
6 chr2:148929800-148960800 Weak transcription Muscle Satellite Cultured Cells --
7 chr2:148930800-148948200 Weak transcription Fetal Adrenal Gland Adrenal Gland
8 chr2:148931000-148960600 Weak transcription Spleen Spleen
9 chr2:148931200-148948400 Weak transcription Pancreas Pancrea
10 chr2:148931200-148958600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
11 chr2:148931200-148993200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
12 chr2:148933800-148953400 Weak transcription Primary neutrophils fromperipheralblood blood
13 chr2:148935600-148946400 Weak transcription Primary T helper naive cells from peripheral blood blood
14 chr2:148937400-148946600 Weak transcription Adipose Nuclei Adipose
15 chr2:148938400-148958600 Weak transcription Fetal Intestine Small intestine
16 chr2:148938400-148969200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
17 chr2:148938600-148947400 Weak transcription Pancreatic Islets Pancreatic Islet
18 chr2:148939000-148946600 Weak transcription Sigmoid Colon Sigmoid Colon
19 chr2:148939000-148958600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
20 chr2:148940800-148947200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
21 chr2:148941000-148958600 Weak transcription Primary hematopoietic stem cells short term culture blood
22 chr2:148941200-148959400 Weak transcription Brain Inferior Temporal Lobe brain
23 chr2:148942800-148946400 Weak transcription Fetal Stomach stomach
24 chr2:148942800-148958600 Weak transcription Cortex derived primary cultured neurospheres brain
25 chr2:148942800-148958800 Weak transcription Breast Myoepithelial Primary Cells Breast
26 chr2:148943800-148946600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
27 chr2:148943800-148947200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
28 chr2:148943800-148961200 Weak transcription Fetal Lung lung
29 chr2:148944000-148947400 Weak transcription Fetal Intestine Large intestine
30 chr2:148944000-148987400 Weak transcription Ovary ovary
31 chr2:148944200-148946600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
32 chr2:148944200-148978400 Weak transcription Left Ventricle heart
33 chr2:148944400-148962200 Weak transcription Primary hematopoietic stem cells blood
34 chr2:148944600-148978400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
35 chr2:148944800-148957400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
36 chr2:148945000-148947000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
37 chr2:148945000-148949600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
38 chr2:148945200-148958600 Weak transcription Primary B cells from cord blood blood
39 chr2:148946200-148947000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
40 chr2:148946200-148947400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
41 chr2:148946200-148958800 Weak transcription Primary T cells from cord blood blood

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Last update: Aug 31, 2015