Variant report

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs10519821	0.89[EUR][1000 genomes]
rs10519850	0.93[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12498817	0.95[ASN][1000 genomes]
rs12500369	0.89[EUR][1000 genomes]
rs12501143	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12501579	0.89[EUR][1000 genomes]
rs12502103	0.93[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12508180	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12508751	0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12512976	0.81[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1370303	0.93[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs17022031	0.89[EUR][1000 genomes]
rs17022270	0.95[ASN][1000 genomes]
rs17609942	0.89[EUR][1000 genomes]
rs17609956	0.89[EUR][1000 genomes]
rs17656106	0.89[EUR][1000 genomes]
rs17656888	0.93[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs17656944	0.81[AMR][1000 genomes];0.93[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs17656983	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17657124	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4835054	0.89[EUR][1000 genomes]
rs4835350	0.89[EUR][1000 genomes]
rs4835351	0.89[EUR][1000 genomes]
rs4835353	0.89[EUR][1000 genomes]
rs57587608	0.93[EUR][1000 genomes]
rs58289064	0.95[ASN][1000 genomes]
rs6814899	0.89[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv880240	chr4:147905897-148032003	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
2	nsv1016598	chr4:147931134-148012064	Active TSS Flanking Active TSS Enhancers Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:147965800-147970400	Weak transcription	Stomach Smooth Muscle	stomach
2	chr4:147966800-147967800	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
3	chr4:147967400-147967800	Enhancers	Fetal Kidney	kidney

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