Variant report

Variant rs12516160
Chromosome Location chr5:61900784-61900785
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:105 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:61793600-61905000 Weak transcription NHEK skin
2 chr5:61803000-61904400 Weak transcription Fetal Kidney kidney
3 chr5:61848200-61939600 Weak transcription Brain Anterior Caudate brain
4 chr5:61856400-61906400 Weak transcription Colon Smooth Muscle Colon
5 chr5:61861400-61902600 Weak transcription Brain Cingulate Gyrus brain
6 chr5:61862200-61902600 Weak transcription Brain Inferior Temporal Lobe brain
7 chr5:61863200-61910200 Weak transcription Right Ventricle heart
8 chr5:61864800-61945800 Weak transcription HSMMtube muscle
9 chr5:61875000-61906600 Weak transcription Primary T helper naive cells from peripheral blood blood
10 chr5:61875000-61922200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
11 chr5:61876200-61904400 Weak transcription Fetal Muscle Leg muscle
12 chr5:61879600-61908800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
13 chr5:61881400-61939400 Weak transcription Spleen Spleen
14 chr5:61881800-61901200 Weak transcription Primary T helper naive cells fromperipheralblood blood
15 chr5:61881800-61905200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
16 chr5:61882000-61916400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
17 chr5:61882200-61902600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
18 chr5:61882200-61925400 Weak transcription Rectal Smooth Muscle rectum
19 chr5:61883400-61925800 Weak transcription Psoas Muscle Psoas
20 chr5:61884000-61910200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
21 chr5:61885800-61904400 Weak transcription Brain Hippocampus Middle brain
22 chr5:61886800-61941200 Weak transcription Skeletal Muscle Male skeletal muscle
23 chr5:61887000-61912000 Weak transcription Brain Angular Gyrus brain
24 chr5:61887000-61922800 Weak transcription Skeletal Muscle Female skeletal muscle
25 chr5:61887400-61903800 Weak transcription Placenta Placenta
26 chr5:61888600-61901000 Weak transcription Primary T helper cells fromperipheralblood blood
27 chr5:61888800-61901600 Weak transcription Primary T cells fromperipheralblood blood
28 chr5:61888800-61904800 Weak transcription Fetal Intestine Small intestine
29 chr5:61888800-61905000 Weak transcription GM12878-XiMat blood
30 chr5:61888800-61905600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
31 chr5:61888800-61910400 Weak transcription Lung lung
32 chr5:61888800-61928000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
33 chr5:61888800-61937000 Weak transcription Gastric stomach
34 chr5:61889000-61901200 Weak transcription Primary T regulatory cells fromperipheralblood blood
35 chr5:61889000-61905200 Weak transcription Fetal Thymus thymus
36 chr5:61889200-61904400 Weak transcription Rectal Mucosa Donor 29 rectum
37 chr5:61889200-61923400 Weak transcription A549 lung
38 chr5:61889400-61907200 Weak transcription HMEC breast
39 chr5:61889400-61907600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
40 chr5:61889600-61901200 Weak transcription Primary T helper cells PMA-I stimulated --
41 chr5:61889600-61925400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
42 chr5:61889600-61929200 Weak transcription NH-A brain
43 chr5:61889600-61936200 Weak transcription Primary B cells from peripheral blood blood
44 chr5:61890600-61902600 Weak transcription Cortex derived primary cultured neurospheres brain
45 chr5:61890800-61905000 Weak transcription Fetal Muscle Trunk muscle
46 chr5:61891000-61902600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
47 chr5:61891000-61905800 Weak transcription H9 Cell Line embryonic stem cell
48 chr5:61891000-61909400 Weak transcription iPS-20b Cell Line embryonic stem cell
49 chr5:61891000-61910200 Weak transcription H1 Cell Line embryonic stem cell
50 chr5:61891000-61910200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell

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