Variant report

Variant	rs12528752
Chromosome Location	chr6:148948923-148948924
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs11155578	0.80[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs11966900	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12661735	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs17078502	0.84[EUR][1000 genomes]
rs2065147	0.98[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs35105989	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4895759	0.94[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs4895760	0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs59522870	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs72994389	0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs911979	0.83[EUR][1000 genomes]

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:148944400-148950200	Weak transcription	Colon Smooth Muscle	Colon
2	chr6:148945600-148950200	Weak transcription	NHDF-Ad	bronchial
3	chr6:148945600-148950600	Weak transcription	Muscle Satellite Cultured Cells	--
4	chr6:148945600-148950600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
5	chr6:148945800-148950400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
6	chr6:148946000-148949200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
7	chr6:148946400-148950600	Weak transcription	Primary monocytes fromperipheralblood	blood
8	chr6:148946800-148950800	Weak transcription	Monocytes-CD14+_RO01746	blood
9	chr6:148947400-148949800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
10	chr6:148947600-148950400	Weak transcription	Adipose Nuclei	Adipose
11	chr6:148947600-148950400	Weak transcription	Fetal Stomach	stomach
12	chr6:148948800-148951000	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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