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Variant report

Variant rs12540205
Chromosome Location chr7:105310593-105310594
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:94 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:105280800-105319400 Weak transcription Aorta Aorta
2 chr7:105284000-105313200 Weak transcription Primary T killer memory cells from peripheral blood blood
3 chr7:105289800-105313200 Weak transcription Psoas Muscle Psoas
4 chr7:105290400-105311800 Weak transcription NHEK skin
5 chr7:105290400-105321800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
6 chr7:105290800-105311000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
7 chr7:105296400-105313000 Weak transcription Brain Angular Gyrus brain
8 chr7:105296400-105313200 Weak transcription Skeletal Muscle Male skeletal muscle
9 chr7:105296600-105313200 Weak transcription Brain Hippocampus Middle brain
10 chr7:105296600-105313800 Weak transcription Small Intestine intestine
11 chr7:105296800-105314000 Weak transcription Brain Inferior Temporal Lobe brain
12 chr7:105297000-105313400 Weak transcription Right Ventricle heart
13 chr7:105297000-105317400 Weak transcription Stomach Mucosa stomach
14 chr7:105302000-105319200 Weak transcription Osteobl bone
15 chr7:105302200-105319200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
16 chr7:105303800-105313400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
17 chr7:105303800-105313400 Weak transcription Left Ventricle heart
18 chr7:105303800-105313400 Weak transcription Rectal Smooth Muscle rectum
19 chr7:105303800-105314400 Weak transcription Esophagus oesophagus
20 chr7:105303800-105317400 Weak transcription Colonic Mucosa Colon
21 chr7:105304000-105313400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
22 chr7:105304000-105313800 Weak transcription Fetal Lung lung
23 chr7:105304200-105313000 Weak transcription Skeletal Muscle Female skeletal muscle
24 chr7:105304200-105317400 Weak transcription Rectal Mucosa Donor 29 rectum
25 chr7:105304400-105313000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
26 chr7:105304400-105317600 Weak transcription Duodenum Smooth Muscle Duodenum
27 chr7:105304800-105313000 Weak transcription Primary T killer naive cells fromperipheralblood blood
28 chr7:105304800-105314000 Weak transcription Sigmoid Colon Sigmoid Colon
29 chr7:105305000-105317400 Weak transcription Fetal Intestine Large intestine
30 chr7:105305600-105313200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
31 chr7:105305600-105313800 Weak transcription Fetal Adrenal Gland Adrenal Gland
32 chr7:105305600-105318400 Weak transcription NHLF lung
33 chr7:105305800-105313000 Weak transcription Stomach Smooth Muscle stomach
34 chr7:105305800-105313400 Weak transcription Fetal Muscle Trunk muscle
35 chr7:105305800-105313800 Weak transcription Brain Substantia Nigra brain
36 chr7:105305800-105313800 Weak transcription Colon Smooth Muscle Colon
37 chr7:105305800-105313800 Weak transcription Right Atrium heart
38 chr7:105305800-105316000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
39 chr7:105306000-105313400 Weak transcription Adipose Nuclei Adipose
40 chr7:105306000-105313600 Weak transcription Primary T helper naive cells from peripheral blood blood
41 chr7:105306000-105313800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
42 chr7:105306000-105313800 Weak transcription Duodenum Mucosa Duodenum
43 chr7:105306200-105313000 Weak transcription Primary hematopoietic stem cells blood
44 chr7:105306200-105313200 Weak transcription Primary T helper cells PMA-I stimulated --
45 chr7:105306200-105313200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
46 chr7:105306200-105313200 Weak transcription Primary T helper cells fromperipheralblood blood
47 chr7:105306200-105313200 Weak transcription Fetal Muscle Leg muscle
48 chr7:105306200-105314200 Weak transcription Rectal Mucosa Donor 31 rectum
49 chr7:105306200-105316400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
50 chr7:105306200-105316400 Weak transcription Placenta Placenta

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Last update: Aug 31, 2015