Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:110106215..110109190-chr8:110112713..110114586,2	K562	blood:

rSNPs within LD-proxies of this variant (count:34)

rs_ID	r²[population]
rs10505126	0.81[ASN][1000 genomes]
rs10955505	0.81[ASN][1000 genomes]
rs11778370	0.91[CHB][hapmap];0.93[CHD][hapmap];0.81[ASN][1000 genomes]
rs12543246	0.81[ASN][1000 genomes]
rs12680028	0.80[ASN][1000 genomes]
rs1380096	0.83[CHB][hapmap]
rs1380097	0.83[CHB][hapmap]
rs1458915	0.83[CHB][hapmap]
rs1458916	0.83[CHB][hapmap]
rs1458917	0.83[CHB][hapmap]
rs1548082	0.83[CHB][hapmap]
rs1548083	0.83[CHB][hapmap]
rs2926198	0.83[CHB][hapmap]
rs2980603	0.83[CHB][hapmap]
rs2980618	0.81[JPT][hapmap]
rs2980619	0.86[CHD][hapmap]
rs3110036	0.83[YRI][hapmap]
rs3134105	0.81[CHB][hapmap]
rs3134108	0.94[ASW][hapmap];0.83[YRI][hapmap]
rs3134113	0.94[ASW][hapmap];0.83[YRI][hapmap]
rs3134115	0.94[ASW][hapmap];0.83[YRI][hapmap]
rs3925088	0.81[ASN][1000 genomes]
rs4129682	0.91[CHB][hapmap];0.93[CHD][hapmap];0.83[ASN][1000 genomes]
rs4130682	0.82[CHB][hapmap]
rs4236802	0.81[ASN][1000 genomes]
rs4301422	0.91[CHB][hapmap];0.81[ASN][1000 genomes]
rs4342559	0.91[CHB][hapmap];0.81[ASN][1000 genomes]
rs4386952	0.83[CHB][hapmap]
rs4735091	0.83[ASN][1000 genomes]
rs4735092	0.91[CHB][hapmap]
rs4735093	0.91[CHB][hapmap];0.93[CHD][hapmap]
rs4735094	0.91[CHB][hapmap];0.81[ASN][1000 genomes]
rs7821463	0.83[ASN][1000 genomes]
rs7840000	0.83[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1022273	chr8:110026712-110146600	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	nsv539715	chr8:110026712-110146600	Weak transcription Enhancers Active TSS ZNF genes & repeats Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

mRNA abundance (count:3)

SNP	Gene	Cis/trans	Tissue	Source
rs12544197	PKHD1L1	cis	lymphoblastoid	seeQTL
rs12544197	PKHD1L1	Cis_1M	lymphoblastoid	RTeQTL
rs12544197	ZFPM2	cis	parietal	SCAN

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:110107600-110108800	Enhancers	Fetal Kidney	kidney

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