Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr9:116646332..116648857-chr9:116689708..116691709,2	K562	blood:
2	chr9:116690832..116694105-chr9:116696668..116699935,3	K562	blood:

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10119978	0.95[CHB][hapmap]
rs10448276	1.00[CHB][hapmap]
rs10739396	0.95[CHB][hapmap]
rs10759664	0.95[CHB][hapmap]
rs10759665	0.95[CHB][hapmap]
rs10759666	0.95[CHB][hapmap]
rs10817535	0.98[ASN][1000 genomes]
rs10982009	0.80[ASN][1000 genomes]
rs1330166	0.95[CHB][hapmap]
rs1536962	0.95[CHB][hapmap]
rs1536965	0.95[CHB][hapmap]
rs1536966	0.95[CHB][hapmap]
rs2026143	0.95[CHB][hapmap]
rs2418260	0.95[CHB][hapmap]
rs2900570	0.95[CHB][hapmap]
rs2900571	0.95[CHB][hapmap]
rs4979298	1.00[CHB][hapmap];1.00[JPT][hapmap];0.93[ASN][1000 genomes]
rs4979307	0.95[CHB][hapmap]
rs7032101	0.95[CHB][hapmap]
rs7869027	0.95[CHB][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv430093	chr9:116330446-117325446	Weak transcription Enhancers Strong transcription Flanking Active TSS Bivalent/Poised TSS Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	165 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:116675800-116691800	Weak transcription	Lung	lung
2	chr9:116679400-116691600	Weak transcription	Pancreas	Pancrea
3	chr9:116682400-116692000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
4	chr9:116686000-116691400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
5	chr9:116686000-116692000	Weak transcription	Fetal Heart	heart
6	chr9:116689600-116691400	ZNF genes & repeats	HSMM	muscle
7	chr9:116689600-116693400	Weak transcription	Fetal Kidney	kidney
8	chr9:116689800-116691800	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
9	chr9:116689800-116692000	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Male	--
10	chr9:116690000-116692400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
11	chr9:116690000-116692400	ZNF genes & repeats	A549	lung
12	chr9:116690600-116691600	ZNF genes & repeats	Ganglion Eminence derived primary cultured neurospheres	brain
13	chr9:116690800-116692000	ZNF genes & repeats	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
14	chr9:116690800-116692800	Weak transcription	Fetal Lung	lung
15	chr9:116691000-116691600	Weak transcription	Muscle Satellite Cultured Cells	--

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