The 2.0 version of rSNPBase

Variant report

Variant rs12564335
Chromosome Location chr1:92998400-92998401
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:27 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:92968200-93042800 Weak transcription HSMM muscle
2 chr1:92971400-92998600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr1:92972600-93013400 Weak transcription Ovary ovary
4 chr1:92973800-93002200 Weak transcription Fetal Intestine Large intestine
5 chr1:92976400-93042400 Weak transcription Fetal Stomach stomach
6 chr1:92977600-93010600 Weak transcription Sigmoid Colon Sigmoid Colon
7 chr1:92977600-93013200 Weak transcription Duodenum Smooth Muscle Duodenum
8 chr1:92979600-93002200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
9 chr1:92981800-93004000 Weak transcription Fetal Adrenal Gland Adrenal Gland
10 chr1:92981800-93033400 Weak transcription NHEK skin
11 chr1:92983400-92998600 Weak transcription Breast Myoepithelial Primary Cells Breast
12 chr1:92983600-93066200 Weak transcription Adipose Nuclei Adipose
13 chr1:92986800-93002400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
14 chr1:92990800-93003800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
15 chr1:92993000-93003600 Weak transcription Fetal Intestine Small intestine
16 chr1:92993000-93007400 Weak transcription Left Ventricle heart
17 chr1:92993400-93002200 Weak transcription Primary monocytes fromperipheralblood blood
18 chr1:92993800-93003600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
19 chr1:92993800-93007200 Weak transcription Monocytes-CD14+_RO01746 blood
20 chr1:92994000-93002400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
21 chr1:92994400-93002200 Weak transcription Liver Liver
22 chr1:92994600-93066000 Weak transcription Placenta Placenta
23 chr1:92997800-92998400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
24 chr1:92997800-92998800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
25 chr1:92997800-92999200 Enhancers Primary T helper cells PMA-I stimulated --
26 chr1:92998000-92998600 Weak transcription HepG2 liver
27 chr1:92998400-93001200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood

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Last update: Aug 31, 2015