Variant report
| Variant | rs12575487 |
|---|---|
| Chromosome Location | chr11:17019317-17019318 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr11:17004800-17034200 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 2 | chr11:17006400-17034000 | Weak transcription | Brain Cingulate Gyrus | brain |
| 3 | chr11:17009400-17032600 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 4 | chr11:17009800-17030000 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 5 | chr11:17009800-17032600 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
| 6 | chr11:17009800-17032600 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 7 | chr11:17010000-17023000 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 8 | chr11:17012400-17024200 | Enhancers | Stomach Mucosa | stomach |
| 9 | chr11:17013400-17033800 | Weak transcription | Brain Substantia Nigra | brain |
| 10 | chr11:17014000-17023400 | Weak transcription | Fetal Stomach | stomach |
| 11 | chr11:17014000-17025000 | Weak transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 12 | chr11:17014200-17021200 | Genic enhancers | Fetal Intestine Small | intestine |
| 13 | chr11:17014200-17021400 | Enhancers | Fetal Intestine Large | intestine |
| 14 | chr11:17014600-17021000 | Enhancers | Pancreas | Pancrea |
| 15 | chr11:17015000-17024800 | Enhancers | Gastric | stomach |
| 16 | chr11:17016000-17022600 | Weak transcription | Esophagus | oesophagus |
| 17 | chr11:17016400-17019400 | Enhancers | Adipose Nuclei | Adipose |
| 18 | chr11:17016400-17034600 | Weak transcription | Aorta | Aorta |
| 19 | chr11:17016600-17030800 | Weak transcription | Fetal Kidney | kidney |
| 20 | chr11:17017400-17019600 | Enhancers | Skeletal Muscle Male | skeletal muscle |
| 21 | chr11:17017400-17019800 | Enhancers | Psoas Muscle | Psoas |
| 22 | chr11:17017400-17019800 | Enhancers | Right Ventricle | heart |
| 23 | chr11:17017600-17019600 | Enhancers | Skeletal Muscle Female | skeletal muscle |
| 24 | chr11:17017600-17020000 | Enhancers | Left Ventricle | heart |
| 25 | chr11:17017800-17019400 | Enhancers | Lung | lung |
| 26 | chr11:17017800-17021200 | Enhancers | Right Atrium | heart |
| 27 | chr11:17018000-17020400 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 28 | chr11:17018000-17028000 | Weak transcription | Stomach Smooth Muscle | stomach |
| 29 | chr11:17018000-17029400 | Weak transcription | Brain Anterior Caudate | brain |
| 30 | chr11:17018400-17020000 | Enhancers | Small Intestine | intestine |
| 31 | chr11:17018400-17021200 | Enhancers | Sigmoid Colon | Sigmoid Colon |
| 32 | chr11:17018600-17019400 | Flanking Active TSS | Colonic Mucosa | Colon |
| 33 | chr11:17018600-17019400 | Flanking Active TSS | Duodenum Mucosa | Duodenum |
| 34 | chr11:17018600-17019800 | Flanking Active TSS | Rectal Mucosa Donor 29 | rectum |
| 35 | chr11:17018800-17032000 | Weak transcription | Fetal Muscle Leg | muscle |
| 36 | chr11:17019000-17019400 | ZNF genes & repeats | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 37 | chr11:17019000-17019600 | Genic enhancers | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 38 | chr11:17019000-17019600 | Flanking Active TSS | Liver | Liver |
| 39 | chr11:17019000-17019600 | Flanking Active TSS | Rectal Mucosa Donor 31 | rectum |
| 40 | chr11:17019000-17032600 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 41 | chr11:17019200-17019600 | Flanking Active TSS | HepG2 | liver |
| 42 | chr11:17019200-17019800 | Strong transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 43 | chr11:17019200-17022800 | Weak transcription | Fetal Heart | heart |
| 44 | chr11:17019200-17023000 | Weak transcription | Spleen | Spleen |
| 45 | chr11:17019200-17025600 | Weak transcription | A549 | lung |
