Variant report
| Variant | rs12581057 |
|---|---|
| Chromosome Location | chr12:49662274-49662275 |
| allele | A/C |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:49659000-49663200 | Transcr. at gene 5' and 3' | A549 | lung |
| 2 | chr12:49659200-49673600 | Weak transcription | Fetal Brain Male | brain |
| 3 | chr12:49659400-49664200 | Transcr. at gene 5' and 3' | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 4 | chr12:49659600-49663200 | Weak transcription | Fetal Brain Female | brain |
| 5 | chr12:49659600-49663400 | Weak transcription | Ovary | ovary |
| 6 | chr12:49659600-49663800 | Weak transcription | Brain Germinal Matrix | brain |
| 7 | chr12:49659600-49664800 | Weak transcription | Fetal Lung | lung |
| 8 | chr12:49659600-49668600 | Weak transcription | Brain Cingulate Gyrus | brain |
| 9 | chr12:49659600-49669600 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 10 | chr12:49659600-49673600 | Weak transcription | Brain Hippocampus Middle | brain |
| 11 | chr12:49659800-49662400 | Weak transcription | Brain Anterior Caudate | brain |
| 12 | chr12:49659800-49662600 | Enhancers | Primary T helper memory cells from peripheral blood 1 | blood |
| 13 | chr12:49659800-49662600 | Weak transcription | Fetal Kidney | kidney |
| 14 | chr12:49659800-49663000 | Enhancers | Primary monocytes fromperipheralblood | blood |
| 15 | chr12:49659800-49663200 | Weak transcription | Primary mononuclear cells fromperipheralblood | Blood |
| 16 | chr12:49659800-49663600 | Weak transcription | Primary B cells from cord blood | blood |
| 17 | chr12:49659800-49663600 | Weak transcription | Aorta | Aorta |
| 18 | chr12:49659800-49663600 | Weak transcription | Colon Smooth Muscle | Colon |
| 19 | chr12:49659800-49663800 | Weak transcription | Primary T helper naive cells fromperipheralblood | blood |
| 20 | chr12:49659800-49668600 | Weak transcription | Right Atrium | heart |
| 21 | chr12:49660000-49662600 | Weak transcription | Fetal Muscle Leg | muscle |
| 22 | chr12:49660000-49663000 | Enhancers | Adipose Nuclei | Adipose |
| 23 | chr12:49660000-49663200 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 24 | chr12:49660200-49663200 | Enhancers | Placenta Amnion | Placenta Amnion |
| 25 | chr12:49660200-49664000 | Transcr. at gene 5' and 3' | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 26 | chr12:49660400-49662800 | Enhancers | Primary T helper memory cells from peripheral blood 2 | blood |
| 27 | chr12:49660400-49662800 | Transcr. at gene 5' and 3' | K562 | blood |
| 28 | chr12:49660400-49663000 | Enhancers | Monocytes-CD14+_RO01746 | blood |
| 29 | chr12:49660400-49663200 | Transcr. at gene 5' and 3' | NHEK | skin |
| 30 | chr12:49660400-49663600 | Weak transcription | Stomach Smooth Muscle | stomach |
| 31 | chr12:49660600-49662400 | Enhancers | Stomach Mucosa | stomach |
| 32 | chr12:49660600-49662800 | Transcr. at gene 5' and 3' | NH-A | brain |
| 33 | chr12:49660600-49663000 | Transcr. at gene 5' and 3' | HUVEC | blood vessel |
| 34 | chr12:49660600-49663400 | Transcr. at gene 5' and 3' | Hela-S3 | cervix |
| 35 | chr12:49660600-49663600 | Weak transcription | Primary B cells from peripheral blood | blood |
| 36 | chr12:49660800-49662600 | Enhancers | Primary T helper cells PMA-I stimulated | -- |
| 37 | chr12:49660800-49662800 | Enhancers | Cortex derived primary cultured neurospheres | brain |
| 38 | chr12:49661000-49662400 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 39 | chr12:49661000-49663000 | Enhancers | Fetal Intestine Large | intestine |
| 40 | chr12:49661000-49663000 | Genic enhancers | Fetal Intestine Small | intestine |
| 41 | chr12:49661000-49663000 | Enhancers | Placenta | Placenta |
| 42 | chr12:49661000-49663400 | Weak transcription | Rectal Smooth Muscle | rectum |
| 43 | chr12:49661000-49663400 | Weak transcription | Spleen | Spleen |
| 44 | chr12:49661000-49663600 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 45 | chr12:49661000-49663600 | Weak transcription | Primary T helper naive cells from peripheral blood | blood |
| 46 | chr12:49661000-49663600 | Weak transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 47 | chr12:49661000-49663800 | Weak transcription | Primary T killer memory cells from peripheral blood | blood |
| 48 | chr12:49661000-49668000 | Strong transcription | H9 Cell Line | embryonic stem cell |
| 49 | chr12:49661000-49669800 | Strong transcription | Fetal Stomach | stomach |
| 50 | chr12:49661200-49663000 | Weak transcription | Thymus | Thymus |
