The 2.0 version of rSNPBase

Variant report

Variant rs12583253
Chromosome Location chr13:96435207-96435208
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:114 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:96367600-96436000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
2 chr13:96394000-96435800 Weak transcription A549 lung
3 chr13:96394400-96438400 Weak transcription Primary T killer naive cells fromperipheralblood blood
4 chr13:96394600-96435800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
5 chr13:96398400-96436200 Weak transcription Colon Smooth Muscle Colon
6 chr13:96398400-96439400 Weak transcription Brain Hippocampus Middle brain
7 chr13:96404000-96439400 Weak transcription Thymus Thymus
8 chr13:96405400-96436800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
9 chr13:96405400-96439400 Weak transcription Brain Cingulate Gyrus brain
10 chr13:96405400-96452600 Weak transcription Psoas Muscle Psoas
11 chr13:96405600-96455800 Weak transcription Fetal Heart heart
12 chr13:96406600-96435800 Weak transcription Gastric stomach
13 chr13:96406600-96436000 Weak transcription NHLF lung
14 chr13:96406800-96435800 Weak transcription Pancreas Pancrea
15 chr13:96407200-96439400 Weak transcription Brain Anterior Caudate brain
16 chr13:96408400-96443600 Weak transcription iPS-20b Cell Line embryonic stem cell
17 chr13:96408600-96443200 Weak transcription HUES48 Cell Line embryonic stem cell
18 chr13:96408600-96445400 Weak transcription K562 blood
19 chr13:96410400-96436200 Weak transcription Aorta Aorta
20 chr13:96411400-96439400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
21 chr13:96412000-96443400 Weak transcription Colonic Mucosa Colon
22 chr13:96413200-96439800 Weak transcription Cortex derived primary cultured neurospheres brain
23 chr13:96414000-96435800 Weak transcription Right Ventricle heart
24 chr13:96414000-96436600 Weak transcription Rectal Smooth Muscle rectum
25 chr13:96414000-96443400 Weak transcription Brain Angular Gyrus brain
26 chr13:96414400-96443400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
27 chr13:96415600-96439400 Weak transcription Brain Inferior Temporal Lobe brain
28 chr13:96416200-96436400 Weak transcription HSMMtube muscle
29 chr13:96416200-96439200 Weak transcription Brain Substantia Nigra brain
30 chr13:96416200-96439200 Weak transcription Fetal Muscle Trunk muscle
31 chr13:96416200-96443400 Weak transcription Skeletal Muscle Male skeletal muscle
32 chr13:96416200-96445400 Weak transcription Fetal Kidney kidney
33 chr13:96416400-96440000 Weak transcription HUES6 Cell Line embryonic stem cell
34 chr13:96416400-96440200 Weak transcription HepG2 liver
35 chr13:96416800-96436200 Weak transcription Placenta Placenta
36 chr13:96417600-96435800 Weak transcription HUVEC blood vessel
37 chr13:96417600-96435800 Weak transcription NHEK skin
38 chr13:96417600-96436000 Weak transcription NH-A brain
39 chr13:96417600-96438400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
40 chr13:96417600-96439400 Weak transcription HUES64 Cell Line embryonic stem cell
41 chr13:96417600-96439400 Weak transcription Skeletal Muscle Female skeletal muscle
42 chr13:96417800-96436000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
43 chr13:96418800-96436200 Weak transcription HMEC breast
44 chr13:96419800-96435800 Weak transcription Osteobl bone
45 chr13:96422200-96440600 Weak transcription Fetal Lung lung
46 chr13:96422400-96439400 Weak transcription Small Intestine intestine
47 chr13:96423800-96436000 Weak transcription HSMM muscle
48 chr13:96423800-96439600 Weak transcription Esophagus oesophagus
49 chr13:96425400-96435800 Weak transcription NHDF-Ad bronchial
50 chr13:96429400-96438000 Weak transcription Primary B cells from peripheral blood blood

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Last update: Aug 31, 2015