Variant report

Variant rs1259335
Chromosome Location chr3:120165305-120165306
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:88 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:120138200-120167800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
2 chr3:120138200-120169200 Weak transcription Gastric stomach
3 chr3:120144400-120165800 Weak transcription Rectal Mucosa Donor 29 rectum
4 chr3:120145800-120168800 Weak transcription Pancreas Pancrea
5 chr3:120151800-120166200 Weak transcription Brain Inferior Temporal Lobe brain
6 chr3:120153000-120167600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
7 chr3:120155800-120168400 Weak transcription ES-WA7 Cell Line embryonic stem cell
8 chr3:120156200-120166200 Weak transcription ES-I3 Cell Line embryonic stem cell
9 chr3:120156600-120168800 Weak transcription Sigmoid Colon Sigmoid Colon
10 chr3:120156800-120166000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
11 chr3:120158000-120166200 Weak transcription Fetal Brain Female brain
12 chr3:120158000-120167600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
13 chr3:120158200-120167400 Weak transcription Brain Germinal Matrix brain
14 chr3:120158400-120165600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
15 chr3:120158800-120166000 Weak transcription Rectal Mucosa Donor 31 rectum
16 chr3:120158800-120167400 Weak transcription A549 lung
17 chr3:120159600-120165800 Weak transcription Spleen Spleen
18 chr3:120160000-120167400 Weak transcription HMEC breast
19 chr3:120160000-120167600 Weak transcription NHEK skin
20 chr3:120160400-120165800 Weak transcription Placenta Placenta
21 chr3:120160600-120165800 Weak transcription iPS-15b Cell Line embryonic stem cell
22 chr3:120160600-120166000 Weak transcription Fetal Adrenal Gland Adrenal Gland
23 chr3:120160600-120167400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
24 chr3:120160800-120166000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
25 chr3:120160800-120166000 Weak transcription Skeletal Muscle Female skeletal muscle
26 chr3:120160800-120166200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
27 chr3:120160800-120167400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
28 chr3:120160800-120167600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
29 chr3:120161000-120165400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
30 chr3:120161000-120166000 Weak transcription H9 Cell Line embryonic stem cell
31 chr3:120161000-120167400 Weak transcription Pancreatic Islets Pancreatic Islet
32 chr3:120161200-120166000 Weak transcription Brain Angular Gyrus brain
33 chr3:120161200-120167400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
34 chr3:120161400-120165800 Weak transcription Fetal Muscle Trunk muscle
35 chr3:120162200-120165800 Genic enhancers Muscle Satellite Cultured Cells --
36 chr3:120162200-120166800 Genic enhancers Foreskin Melanocyte Primary Cells skin03 Skin
37 chr3:120162200-120166800 Genic enhancers NH-A brain
38 chr3:120162200-120168800 Weak transcription Esophagus oesophagus
39 chr3:120162400-120165400 Strong transcription HUES6 Cell Line embryonic stem cell
40 chr3:120162600-120165800 Weak transcription Fetal Brain Male brain
41 chr3:120162800-120166000 Strong transcription HUES64 Cell Line embryonic stem cell
42 chr3:120163000-120169000 Transcr. at gene 5' and 3' Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
43 chr3:120163200-120165400 Weak transcription Fetal Kidney kidney
44 chr3:120163200-120166400 Genic enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
45 chr3:120163400-120165600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
46 chr3:120163800-120165800 Strong transcription HUES48 Cell Line embryonic stem cell
47 chr3:120163800-120166000 Strong transcription iPS-18 Cell Line embryonic stem cell
48 chr3:120163800-120166600 Transcr. at gene 5' and 3' NHDF-Ad bronchial
49 chr3:120163800-120167800 Transcr. at gene 5' and 3' Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
50 chr3:120164600-120165800 Genic enhancers IMR90 fetal lung fibroblasts Cell Line lung

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