Variant report

Variant	rs12593384
Chromosome Location	chr15:34634626-34634627
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:20)
CpG islands
(count:0)
Chromatin interactive
region (count:10)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:20 , 50 per page) page: 1

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	RCOR1	chr15:34634545-34634741	Hela-S3	cervix:	n/a	n/a
2	TAF1	chr15:34634445-34634959	H1-hESC	embryonic stem cell:	n/a	n/a
3	MYC	chr15:34634605-34634740	K562	blood:	n/a	n/a
4	MXI1	chr15:34634162-34636033	SK-N-SH	brain:	n/a	n/a
5	HA-E2F1	chr15:34634031-34635446	MCF-7	breast:	n/a	chr15:34634368-34634375 chr15:34634368-34634375 chr15:34634365-34634379 chr15:34634368-34634375
6	CEBPB	chr15:34634606-34634629	H1-hESC	embryonic stem cell:	n/a	n/a
7	POLR2A	chr15:34634450-34635659	K562	blood:	n/a	n/a
8	ZNF384	chr15:34634576-34634820	GM12878	blood:	n/a	n/a
9	YY1	chr15:34634418-34634919	K562	blood:	n/a	n/a
10	YY1	chr15:34634516-34634936	GM12878	blood:	n/a	n/a
11	POLR2A	chr15:34634596-34634735	GM12878	blood:	n/a	n/a
12	RUNX3	chr15:34634453-34634873	GM12878	blood:	n/a	n/a
13	CTCF	chr15:34634620-34634770	HCPEpiC	choroid plexus:	n/a	n/a
14	POLR2A	chr15:34634389-34635700	HepG2	liver:	n/a	n/a
15	RAD21	chr15:34634578-34634685	A549	lung:	n/a	n/a
16	YY1	chr15:34634581-34635070	H1-hESC	embryonic stem cell:	n/a	n/a
17	POLR2A	chr15:34634595-34634730	MCF-7	breast:	n/a	n/a
18	POLR2A	chr15:34633700-34635718	K562	blood:	n/a	n/a
19	TCF7L2	chr15:34634579-34634764	Hela-S3	cervix:	n/a	n/a
20	ZNF384	chr15:34634539-34635688	K562	blood:	n/a	n/a

No data

(count:10 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr15:34634571..34635945-chr15:34658808..34660439,12	MCF-7	breast:
2	chr15:34632776..34635331-chr15:34879472..34881728,2	K562	blood:
3	chr15:34632008..34636763-chr15:34655757..34660926,8	K562	blood:
4	chr15:34633629..34635584-chr15:34657779..34659599,2	MCF-7	breast:
5	chr15:34628783..34632143-chr15:34633761..34637127,4	MCF-7	breast:
6	chr15:34632759..34637829-chr15:34654252..34657716,5	K562	blood:
7	chr15:34633865..34636798-chr15:34637017..34639359,2	K562	blood:
8	chr15:34633689..34636672-chr15:34659379..34661265,2	MCF-7	breast:
9	chr15:34633931..34636680-chr15:34728775..34730381,2	K562	blood:
10	chr15:34515820..34518714-chr15:34632646..34635084,3	MCF-7	breast:

No data

Variant related genes	Relation type
NUTM1	TF binding region
SLC12A6	TF binding region
ENSG00000140199	Chromatin interaction
ENSG00000175265	Chromatin interaction
ENSG00000176454	Chromatin interaction
ENSG00000184507	Chromatin interaction
ENSG00000128463	Chromatin interaction
ENSG00000215252	Chromatin interaction

Extended variants
information (count: 144 )
Associated
traits (count: 9 )

rSNPs within LD-proxies of this variant (count:112)

rs_ID	r²[population]
rs104017	0.90[ASN][1000 genomes]
rs1045194	0.85[AMR][1000 genomes]
rs1045238	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11631094	0.85[ASN][1000 genomes]
rs12591967	0.83[ASN][1000 genomes]
rs12592913	0.94[AFR][1000 genomes];0.95[ASN][1000 genomes]
rs12595504	0.94[AFR][1000 genomes];0.96[ASN][1000 genomes]
rs168335	0.80[ASN][1000 genomes]
rs16958910	0.82[ASN][1000 genomes]
rs16958954	0.84[ASN][1000 genomes]
rs16958995	0.91[ASN][1000 genomes]
rs16959012	0.80[AMR][1000 genomes];0.81[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs16959014	0.95[ASN][1000 genomes]
rs16959020	0.80[AMR][1000 genomes];0.81[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs16959021	0.85[AMR][1000 genomes];0.81[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs180886	0.81[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1845773	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs186987	0.81[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2126421	0.82[ASN][1000 genomes]
rs2219668	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2615357	0.91[ASN][1000 genomes]
rs2644243	0.82[ASN][1000 genomes]
rs2644245	0.88[ASN][1000 genomes]
rs28539755	0.92[ASN][1000 genomes]
rs3063	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34639726	0.92[AFR][1000 genomes];0.96[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs347805	0.83[ASN][1000 genomes]
rs347806	0.80[ASN][1000 genomes]
rs347807	0.80[ASN][1000 genomes]
rs347817	0.81[ASN][1000 genomes]
rs347827	0.88[ASN][1000 genomes]
rs347830	0.90[ASN][1000 genomes]
rs347831	0.81[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs347832	0.81[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs347833	0.81[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs347834	0.81[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs347835	0.82[ASN][1000 genomes]
rs347836	0.90[ASN][1000 genomes]
rs347837	0.94[ASN][1000 genomes]
rs347838	0.94[ASN][1000 genomes]
rs347842	0.84[ASN][1000 genomes]
rs347843	0.84[ASN][1000 genomes]
rs347847	0.82[ASN][1000 genomes]
rs347849	0.82[ASN][1000 genomes]
rs347851	0.82[ASN][1000 genomes]
rs347858	0.85[ASN][1000 genomes]
rs347861	0.81[ASN][1000 genomes]
rs380248	0.92[ASN][1000 genomes]
rs405080	0.82[ASN][1000 genomes]
rs422388	0.94[ASN][1000 genomes]
rs4569235	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55745608	0.82[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs56057955	0.89[AFR][1000 genomes];0.98[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56762274	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57715165	0.88[ASN][1000 genomes]
rs57875866	0.85[ASN][1000 genomes]
rs58261770	0.81[AFR][1000 genomes]
rs58343025	0.80[AMR][1000 genomes];0.81[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs58401365	0.80[ASN][1000 genomes]
rs59375529	0.87[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs59452641	0.85[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs59861881	0.92[AFR][1000 genomes];0.98[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs60114685	0.84[ASN][1000 genomes]
rs60156693	0.80[AMR][1000 genomes];0.81[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs60539207	0.84[ASN][1000 genomes]
rs61376537	0.85[ASN][1000 genomes]
rs6495660	0.89[ASN][1000 genomes]
rs6495661	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6495662	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7163195	0.85[AMR][1000 genomes];0.81[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7163919	0.84[ASN][1000 genomes]
rs7166043	0.82[ASN][1000 genomes]
rs7166066	0.80[AMR][1000 genomes];0.81[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7169857	0.94[AFR][1000 genomes];0.96[ASN][1000 genomes]
rs7170785	0.92[AFR][1000 genomes];0.96[ASN][1000 genomes]
rs7175028	0.92[ASN][1000 genomes]
rs7176009	0.92[ASN][1000 genomes]
rs7176426	0.92[ASN][1000 genomes]
rs7182584	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72486679	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73374434	0.88[ASN][1000 genomes]
rs73374455	0.82[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs73374473	0.81[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs73374475	0.95[ASN][1000 genomes]
rs73374477	0.95[ASN][1000 genomes]
rs73374490	0.85[AFR][1000 genomes];0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs73374491	0.88[AFR][1000 genomes];0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs73374493	0.93[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs73374500	0.86[AFR][1000 genomes];0.98[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73374502	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73376010	0.92[AFR][1000 genomes];0.82[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs73390084	0.81[ASN][1000 genomes]
rs73392004	0.84[ASN][1000 genomes]
rs7495538	0.82[ASN][1000 genomes]
rs756086	0.90[ASN][1000 genomes]
rs8023583	0.85[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs8025057	0.89[ASN][1000 genomes]
rs8031145	0.80[AMR][1000 genomes];0.81[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs8031147	0.80[AMR][1000 genomes];0.81[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs8031404	0.94[AFR][1000 genomes];0.96[ASN][1000 genomes]
rs8031958	0.95[ASN][1000 genomes]
rs8031961	0.94[AFR][1000 genomes];0.95[ASN][1000 genomes]
rs8032347	0.94[AFR][1000 genomes];0.96[ASN][1000 genomes]
rs8033032	0.83[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs8037379	0.95[ASN][1000 genomes]
rs8038177	0.90[ASN][1000 genomes]
rs8042163	0.80[AMR][1000 genomes];0.81[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs8043005	0.88[ASN][1000 genomes]
rs924065	0.85[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs9630418	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9972305	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9972323	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes];0.95[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:32 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1052804	chr15:34498529-34841447	Active TSS Strong transcription Weak transcription Enhancers Genic enhancers Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	43 gene(s)	inside rSNPs	diseases
2	nsv542341	chr15:34498529-34841447	Weak transcription Bivalent/Poised TSS Active TSS Flanking Active TSS Strong transcription Enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	43 gene(s)	inside rSNPs	diseases
3	esv1798578	chr15:34543021-34988247	Enhancers Weak transcription Bivalent/Poised TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Strong transcription Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	45 gene(s)	inside rSNPs	diseases
4	esv1804312	chr15:34543021-34988247	Weak transcription Flanking Active TSS Strong transcription Enhancers Genic enhancers Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	45 gene(s)	inside rSNPs	diseases
5	esv1821622	chr15:34543021-34988247	Active TSS Weak transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Strong transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	45 gene(s)	inside rSNPs	diseases
6	esv1850950	chr15:34543021-34988247	Active TSS Weak transcription Flanking Active TSS Enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	45 gene(s)	inside rSNPs	diseases
7	esv2758376	chr15:34543021-34988247	Flanking Bivalent TSS/Enh Enhancers Transcr. at gene 5' and 3' Weak transcription Bivalent/Poised TSS Strong transcription Active TSS Flanking Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	45 gene(s)	inside rSNPs	diseases
8	esv2760024	chr15:34543021-34988247	Flanking Active TSS Enhancers Strong transcription Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Weak transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	45 gene(s)	inside rSNPs	diseases
9	nsv428303	chr15:34543021-34988247	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Strong transcription Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	45 gene(s)	inside rSNPs	diseases
10	nsv1036475	chr15:34552879-34841587	Bivalent/Poised TSS Enhancers Active TSS ZNF genes & repeats Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Weak transcription Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	36 gene(s)	inside rSNPs	diseases
11	nsv542342	chr15:34552879-34841587	Active TSS Weak transcription Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	36 gene(s)	inside rSNPs	diseases
12	nsv1048550	chr15:34553078-34841447	Flanking Active TSS Enhancers Active TSS Weak transcription Strong transcription Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	36 gene(s)	inside rSNPs	diseases
13	nsv542343	chr15:34553078-34841447	Active TSS Genic enhancers Enhancers Flanking Active TSS Bivalent/Poised TSS Weak transcription Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	36 gene(s)	inside rSNPs	diseases
14	nsv471682	chr15:34560451-34882630	Enhancers Transcr. at gene 5' and 3' Weak transcription Flanking Active TSS Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Strong transcription ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	38 gene(s)	inside rSNPs	diseases
15	nsv469547	chr15:34594557-34757807	Genic enhancers Active TSS Weak transcription Enhancers Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	33 gene(s)	inside rSNPs	diseases
16	nsv482528	chr15:34594557-34757807	Active TSS Flanking Active TSS Enhancers Bivalent Enhancer Weak transcription ZNF genes & repeats Strong transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	33 gene(s)	inside rSNPs	diseases
17	esv1817014	chr15:34598601-34911177	Flanking Active TSS Enhancers Strong transcription Genic enhancers Weak transcription Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	39 gene(s)	inside rSNPs	diseases
18	esv1817924	chr15:34598601-34911177	Bivalent/Poised TSS Weak transcription Active TSS Enhancers Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	39 gene(s)	inside rSNPs	diseases
19	esv1847172	chr15:34598601-34911177	Enhancers Active TSS Strong transcription Flanking Active TSS Weak transcription Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	39 gene(s)	inside rSNPs	diseases
20	esv1802396	chr15:34598601-34988247	Flanking Active TSS Active TSS Enhancers Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	45 gene(s)	inside rSNPs	diseases
21	esv1809360	chr15:34598601-34988247	Enhancers Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Weak transcription Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	45 gene(s)	inside rSNPs	diseases
22	esv1844776	chr15:34598601-34988247	Enhancers Weak transcription Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	45 gene(s)	inside rSNPs	diseases
23	nsv427957	chr15:34598601-34988247	Weak transcription Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Active TSS Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	45 gene(s)	inside rSNPs	diseases
24	nsv1039577	chr15:34624178-34962093	Bivalent Enhancer Transcr. at gene 5' and 3' Weak transcription Flanking Active TSS Enhancers Active TSS Bivalent/Poised TSS Strong transcription Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	39 gene(s)	inside rSNPs	diseases
25	nsv542344	chr15:34624178-34962093	Active TSS Enhancers Strong transcription Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	39 gene(s)	inside rSNPs	diseases
26	nsv542345	chr15:34626815-34841586	Strong transcription Weak transcription Active TSS Enhancers Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	34 gene(s)	inside rSNPs	diseases
27	nsv542346	chr15:34627015-34841447	Weak transcription Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Active TSS Enhancers Strong transcription Bivalent/Poised TSS Active TSS Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	34 gene(s)	inside rSNPs	diseases
28	nsv915918	chr15:34627109-34841422	Weak transcription Enhancers Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	34 gene(s)	inside rSNPs	diseases
29	nsv916680	chr15:34627109-34964198	Active TSS Weak transcription Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	40 gene(s)	inside rSNPs	diseases
30	esv1822549	chr15:34628041-34909164	Weak transcription Bivalent Enhancer Flanking Active TSS Enhancers Active TSS Flanking Bivalent TSS/Enh Genic enhancers Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	37 gene(s)	inside rSNPs	diseases
31	nsv1038524	chr15:34628041-34962093	Flanking Bivalent TSS/Enh Enhancers Strong transcription Weak transcription Bivalent/Poised TSS Flanking Active TSS Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	39 gene(s)	inside rSNPs	diseases
32	nsv542347	chr15:34628041-34962093	Active TSS Weak transcription Flanking Bivalent TSS/Enh Strong transcription Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Genic enhancers Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	39 gene(s)	inside rSNPs	diseases

mRNA abundance (count:9)

SNP	Gene	Cis/trans	Tissue	Source
rs12593384	NOP10	cis	Esophagus Muscularis	GTEx
rs12593384	NOP10	cis	Heart Left Ventricle	GTEx
rs12593384	NOP10	cis	Thyroid	GTEx
rs12593384	NOP10	cis	Skin Sun Exposed Lower leg	GTEx
rs12593384	NOP10	cis	Muscle Skeletal	GTEx
rs12593384	NOP10	cis	Esophagus Mucosa	GTEx
rs12593384	SLC12A6	cis	Thyroid	GTEx
rs12593384	NOP10	cis	Nerve Tibial	GTEx
rs12593384	NOP10	cis	Artery Tibial	GTEx

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:34630600-34635000	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
2	chr15:34633200-34634800	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
3	chr15:34633600-34634800	Enhancers	Small Intestine	intestine
4	chr15:34633800-34634800	Flanking Active TSS	Primary monocytes fromperipheralblood	blood
5	chr15:34633800-34634800	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
6	chr15:34633800-34635400	Active TSS	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
7	chr15:34633800-34635400	Transcr. at gene 5' and 3'	Primary T helper 17 cells PMA-I stimulated	--
8	chr15:34634000-34634800	Flanking Active TSS	Adipose Nuclei	Adipose
9	chr15:34634000-34635000	Flanking Active TSS	Primary hematopoietic stem cells	blood
10	chr15:34634000-34635400	Transcr. at gene 5' and 3'	Primary T helper naive cells fromperipheralblood	blood
11	chr15:34634000-34635600	Active TSS	Colonic Mucosa	Colon
12	chr15:34634000-34635800	Active TSS	Fetal Kidney	kidney
13	chr15:34634200-34634800	Flanking Active TSS	Fetal Muscle Trunk	muscle
14	chr15:34634200-34635000	Active TSS	Brain Germinal Matrix	brain
15	chr15:34634200-34635200	Flanking Active TSS	Primary B cells from cord blood	blood
16	chr15:34634200-34635400	Active TSS	iPS DF 19.11 Cell Line	embryonic stem cell
17	chr15:34634200-34635400	Active TSS	Muscle Satellite Cultured Cells	--
18	chr15:34634200-34635400	Active TSS	Brain Inferior Temporal Lobe	brain
19	chr15:34634200-34635400	Active TSS	NHLF	lung
20	chr15:34634200-34635600	Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
21	chr15:34634200-34635800	Active TSS	iPS-20b Cell Line	embryonic stem cell
22	chr15:34634200-34635800	Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
23	chr15:34634200-34635800	Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
24	chr15:34634200-34636000	Active TSS	ES-I3 Cell Line	embryonic stem cell
25	chr15:34634200-34636000	Active TSS	H9 Cell Line	embryonic stem cell
26	chr15:34634200-34636000	Active TSS	iPS-15b Cell Line	embryonic stem cell
27	chr15:34634400-34634800	Flanking Active TSS	H1 Derived Mesenchymal Stem Cells	ES cell derived
28	chr15:34634400-34634800	Flanking Active TSS	Primary B cells from peripheral blood	blood
29	chr15:34634400-34634800	Flanking Active TSS	Primary Natural Killer cells fromperipheralblood	blood
30	chr15:34634400-34634800	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
31	chr15:34634400-34634800	Flanking Active TSS	Fetal Brain Male	brain
32	chr15:34634400-34634800	Flanking Active TSS	Fetal Muscle Leg	muscle
33	chr15:34634400-34634800	Flanking Active TSS	Fetal Stomach	stomach
34	chr15:34634400-34634800	Flanking Active TSS	Fetal Thymus	thymus
35	chr15:34634400-34635000	Flanking Active TSS	Primary neutrophils fromperipheralblood	blood
36	chr15:34634400-34635000	Flanking Active TSS	Primary T cells fromperipheralblood	blood
37	chr15:34634400-34635000	Flanking Active TSS	Primary T helper cells fromperipheralblood	blood
38	chr15:34634400-34635400	Active TSS	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
39	chr15:34634400-34635400	Active TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
40	chr15:34634400-34635400	Active TSS	iPS-18 Cell Line	embryonic stem cell
41	chr15:34634400-34635400	Active TSS	Primary hematopoietic stem cells short term culture	blood
42	chr15:34634400-34635400	Active TSS	Primary T helper cells PMA-I stimulated	--
43	chr15:34634400-34635400	Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
44	chr15:34634400-34635400	Active TSS	Aorta	Aorta
45	chr15:34634400-34635400	Active TSS	Esophagus	oesophagus
46	chr15:34634400-34635400	Active TSS	Fetal Intestine Large	intestine
47	chr15:34634400-34635400	Active TSS	Gastric	stomach
48	chr15:34634400-34635400	Active TSS	Lung	lung
49	chr15:34634400-34635400	Active TSS	Ovary	ovary
50	chr15:34634400-34635400	Active TSS	Pancreas	Pancrea

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