Variant report

Variant	rs12621444
Chromosome Location	chr2:210403702-210403703
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 29 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:29)

rs_ID	r²[population]
rs10204207	0.80[ASN][1000 genomes]
rs11896762	0.85[EUR][1000 genomes]
rs12105310	0.90[AFR][1000 genomes]
rs12613572	0.86[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12620654	0.83[EUR][1000 genomes]
rs12623006	0.94[ASN][1000 genomes]
rs16843034	0.87[EUR][1000 genomes]
rs288070	0.96[ASN][1000 genomes]
rs288071	0.96[ASN][1000 genomes]
rs288087	0.84[ASN][1000 genomes]
rs288088	0.84[ASN][1000 genomes]
rs288089	1.00[ASN][1000 genomes]
rs288091	1.00[ASN][1000 genomes]
rs288094	1.00[ASN][1000 genomes]
rs288096	0.97[ASN][1000 genomes]
rs56023260	0.82[EUR][1000 genomes]
rs56164239	0.84[ASN][1000 genomes]
rs56677957	0.80[ASN][1000 genomes]
rs57114516	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57383822	0.82[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs57781584	0.82[EUR][1000 genomes]
rs59883519	0.81[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs60497472	0.82[EUR][1000 genomes]
rs6722585	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6752348	0.96[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73071034	0.99[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7568260	0.96[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7593381	0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7594825	1.00[ASN][1000 genomes]

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:210392000-210406000	Weak transcription	Fetal Brain Female	brain
2	chr2:210392400-210405400	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr2:210393400-210405400	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
4	chr2:210397000-210406800	Weak transcription	Pancreatic Islets	Pancreatic Islet
5	chr2:210399000-210405600	Weak transcription	Cortex derived primary cultured neurospheres	brain
6	chr2:210401400-210405200	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
7	chr2:210402600-210405400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived

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