Variant report

Variant rs12622583
Chromosome Location chr2:133428869-133428870
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:90 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:133425400-133429200 Bivalent/Poised TSS HUES64 Cell Line embryonic stem cell
2 chr2:133425800-133429000 Flanking Bivalent TSS/Enh Brain Germinal Matrix brain
3 chr2:133425800-133429200 Bivalent/Poised TSS HUES6 Cell Line embryonic stem cell
4 chr2:133425800-133429200 Bivalent/Poised TSS iPS-15b Cell Line embryonic stem cell
5 chr2:133425800-133429200 Flanking Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
6 chr2:133425800-133429200 Active TSS Fetal Kidney kidney
7 chr2:133426000-133429000 Flanking Active TSS H1 Derived Mesenchymal Stem Cells ES cell derived
8 chr2:133426000-133429000 Active TSS H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr2:133426000-133429000 Bivalent/Poised TSS Rectal Smooth Muscle rectum
10 chr2:133426000-133429200 Bivalent/Poised TSS HUES48 Cell Line embryonic stem cell
11 chr2:133426000-133429400 Bivalent/Poised TSS iPS-18 Cell Line embryonic stem cell
12 chr2:133426000-133429400 Bivalent/Poised TSS iPS-20b Cell Line embryonic stem cell
13 chr2:133426400-133429000 Active TSS Pancreatic Islets Pancreatic Islet
14 chr2:133426600-133429000 Flanking Bivalent TSS/Enh Adipose Nuclei Adipose
15 chr2:133426600-133429000 Flanking Bivalent TSS/Enh Fetal Muscle Leg muscle
16 chr2:133426600-133429000 Flanking Bivalent TSS/Enh Stomach Smooth Muscle stomach
17 chr2:133426600-133429000 Bivalent Enhancer Spleen Spleen
18 chr2:133426600-133429200 Flanking Bivalent TSS/Enh Foreskin Keratinocyte Primary Cells skin03 Skin
19 chr2:133426800-133429000 Bivalent/Poised TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
20 chr2:133427000-133429000 Active TSS ES-WA7 Cell Line embryonic stem cell
21 chr2:133427000-133429000 Flanking Bivalent TSS/Enh Foreskin Fibroblast Primary Cells skin01 Skin
22 chr2:133427000-133429000 Flanking Bivalent TSS/Enh Foreskin Fibroblast Primary Cells skin02 Skin
23 chr2:133427000-133429000 Flanking Active TSS Liver Liver
24 chr2:133427000-133429000 Bivalent Enhancer Sigmoid Colon Sigmoid Colon
25 chr2:133427200-133429000 Flanking Active TSS Cortex derived primary cultured neurospheres brain
26 chr2:133427200-133429000 Active TSS Brain Substantia Nigra brain
27 chr2:133427400-133429000 Active TSS Brain Angular Gyrus brain
28 chr2:133427600-133429000 Bivalent/Poised TSS Colon Smooth Muscle Colon
29 chr2:133427800-133429000 Active TSS Brain Inferior Temporal Lobe brain
30 chr2:133427800-133429000 Flanking Bivalent TSS/Enh Fetal Muscle Trunk muscle
31 chr2:133428000-133429000 Flanking Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
32 chr2:133428000-133429000 Flanking Bivalent TSS/Enh Foreskin Melanocyte Primary Cells skin01 Skin
33 chr2:133428000-133429000 Flanking Bivalent TSS/Enh Fetal Stomach stomach
34 chr2:133428000-133429000 Flanking Active TSS Right Ventricle heart
35 chr2:133428000-133429200 Flanking Active TSS IMR90 fetal lung fibroblasts Cell Line lung
36 chr2:133428000-133429200 Flanking Bivalent TSS/Enh Fetal Intestine Small intestine
37 chr2:133428000-133429400 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
38 chr2:133428000-133429400 Flanking Active TSS HUVEC blood vessel
39 chr2:133428200-133429000 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
40 chr2:133428200-133429000 Flanking Active TSS Brain Hippocampus Middle brain
41 chr2:133428200-133429000 Flanking Bivalent TSS/Enh Brain Dorsolateral Prefrontal Cortex brain
42 chr2:133428200-133429000 Bivalent Enhancer Placenta Placenta
43 chr2:133428200-133429200 Flanking Active TSS Osteobl bone
44 chr2:133428200-133429400 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
45 chr2:133428400-133429000 Flanking Bivalent TSS/Enh H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
46 chr2:133428400-133429000 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
47 chr2:133428400-133429000 Bivalent Enhancer Fetal Adrenal Gland Adrenal Gland
48 chr2:133428400-133429000 Flanking Active TSS HSMM muscle
49 chr2:133428400-133429000 Flanking Active TSS NH-A brain
50 chr2:133428400-133429200 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived

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