The 2.0 version of rSNPBase

Variant report

Variant rs12640698
Chromosome Location chr4:144104094-144104095
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:57 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:144096600-144104800 Weak transcription Brain Inferior Temporal Lobe brain
2 chr4:144097800-144104800 Weak transcription Psoas Muscle Psoas
3 chr4:144098000-144104400 Weak transcription Brain Hippocampus Middle brain
4 chr4:144098400-144104800 Weak transcription HSMMtube muscle
5 chr4:144098600-144104600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr4:144099200-144105400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
7 chr4:144099200-144105400 Weak transcription Left Ventricle heart
8 chr4:144099200-144105400 Weak transcription Small Intestine intestine
9 chr4:144099800-144104800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
10 chr4:144100200-144105000 Weak transcription Stomach Mucosa stomach
11 chr4:144100200-144105000 Weak transcription Monocytes-CD14+_RO01746 blood
12 chr4:144100600-144104600 Weak transcription Rectal Mucosa Donor 31 rectum
13 chr4:144100600-144104800 Weak transcription ES-I3 Cell Line embryonic stem cell
14 chr4:144100600-144104800 Weak transcription Fetal Lung lung
15 chr4:144100600-144105000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
16 chr4:144100600-144105200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
17 chr4:144101000-144104600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
18 chr4:144102400-144104800 Enhancers Primary T helper cells PMA-I stimulated --
19 chr4:144103000-144105000 Enhancers Primary T helper naive cells fromperipheralblood blood
20 chr4:144103200-144104600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
21 chr4:144103200-144104800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
22 chr4:144103200-144104800 Enhancers Primary T regulatory cells fromperipheralblood blood
23 chr4:144103400-144104600 Enhancers Primary T cells from cord blood blood
24 chr4:144103400-144104800 Enhancers Primary T helper cells fromperipheralblood blood
25 chr4:144103400-144105000 Enhancers Primary T killer naive cells fromperipheralblood blood
26 chr4:144103600-144104600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
27 chr4:144103600-144104800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
28 chr4:144103600-144104800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
29 chr4:144103600-144105000 Enhancers Primary hematopoietic stem cells blood
30 chr4:144103600-144105000 Enhancers Primary T helper naive cells from peripheral blood blood
31 chr4:144103600-144105000 Enhancers Primary T helper 17 cells PMA-I stimulated --
32 chr4:144103600-144105000 Enhancers Primary T killer memory cells from peripheral blood blood
33 chr4:144103600-144105200 Enhancers NH-A brain
34 chr4:144103800-144104600 Enhancers Primary hematopoietic stem cells short term culture blood
35 chr4:144103800-144104600 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
36 chr4:144103800-144104600 Weak transcription Duodenum Mucosa Duodenum
37 chr4:144103800-144104600 Enhancers Pancreatic Islets Pancreatic Islet
38 chr4:144103800-144104600 Enhancers HSMM muscle
39 chr4:144103800-144104800 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
40 chr4:144103800-144104800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
41 chr4:144103800-144104800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
42 chr4:144103800-144104800 Enhancers Muscle Satellite Cultured Cells --
43 chr4:144103800-144104800 Enhancers Fetal Kidney kidney
44 chr4:144103800-144105000 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
45 chr4:144103800-144105000 Enhancers Osteobl bone
46 chr4:144104000-144104200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
47 chr4:144104000-144104200 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
48 chr4:144104000-144104200 Flanking Active TSS Dnd41 blood
49 chr4:144104000-144104200 Active TSS GM12878-XiMat blood
50 chr4:144104000-144104400 Enhancers H9 Derived Neuron Cultured Cells ES cell derived

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Last update: Aug 31, 2015