The 2.0 version of rSNPBase

Variant report

Variant rs12675369
Chromosome Location chr8:63945316-63945317
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:63922600-63949200 Weak transcription Fetal Brain Female brain
2 chr8:63922800-63950000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
3 chr8:63922800-63950000 Weak transcription HMEC breast
4 chr8:63922800-63950800 Weak transcription Fetal Muscle Leg muscle
5 chr8:63923800-63950600 Weak transcription Fetal Kidney kidney
6 chr8:63926200-63949000 Weak transcription Brain Germinal Matrix brain
7 chr8:63926200-63949400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
8 chr8:63929200-63949200 Weak transcription Fetal Brain Male brain
9 chr8:63929400-63945400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
10 chr8:63931400-63950000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
11 chr8:63935400-63949200 Weak transcription K562 blood
12 chr8:63935800-63950000 Weak transcription NHDF-Ad bronchial
13 chr8:63936200-63949600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
14 chr8:63936400-63948800 Weak transcription GM12878-XiMat blood
15 chr8:63936400-63949400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
16 chr8:63936800-63949800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
17 chr8:63936800-63949800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
18 chr8:63938000-63949200 Weak transcription NHEK skin
19 chr8:63938000-63950000 Weak transcription H9 Cell Line embryonic stem cell
20 chr8:63938200-63950600 Weak transcription Skeletal Muscle Male skeletal muscle
21 chr8:63938600-63948600 Weak transcription NH-A brain
22 chr8:63938600-63949200 Weak transcription HUVEC blood vessel
23 chr8:63939200-63950000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
24 chr8:63939600-63949200 Weak transcription Primary hematopoietic stem cells short term culture blood
25 chr8:63941200-63949600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
26 chr8:63941400-63948600 Weak transcription Cortex derived primary cultured neurospheres brain
27 chr8:63942000-63949000 Weak transcription Sigmoid Colon Sigmoid Colon
28 chr8:63942600-63950000 Weak transcription Rectal Mucosa Donor 31 rectum
29 chr8:63943400-63945400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
30 chr8:63943400-63949000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
31 chr8:63943600-63949600 Weak transcription iPS-18 Cell Line embryonic stem cell
32 chr8:63943800-63949000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
33 chr8:63944200-63945800 Enhancers Fetal Intestine Large intestine
34 chr8:63944200-63948800 Weak transcription Liver Liver
35 chr8:63944400-63948600 Weak transcription HepG2 liver
36 chr8:63944600-63946000 Enhancers Primary monocytes fromperipheralblood blood
37 chr8:63944800-63946000 Enhancers Monocytes-CD14+_RO01746 blood
38 chr8:63945000-63945800 Enhancers Primary neutrophils fromperipheralblood blood
39 chr8:63945000-63945800 Enhancers Fetal Intestine Small intestine
40 chr8:63945200-63946000 Enhancers A549 lung

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Last update: Aug 31, 2015