Variant report

Variant rs12685176
Chromosome Location chr9:714540-714541
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:105 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:709200-715600 Weak transcription Primary monocytes fromperipheralblood blood
2 chr9:709200-715800 Weak transcription Fetal Brain Female brain
3 chr9:709600-727800 Weak transcription Stomach Mucosa stomach
4 chr9:710400-715000 Strong transcription Fetal Intestine Small intestine
5 chr9:710400-715600 Genic enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
6 chr9:710600-715400 Strong transcription NHEK skin
7 chr9:710800-714600 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
8 chr9:710800-714600 Strong transcription Fetal Intestine Large intestine
9 chr9:711200-717000 Transcr. at gene 5' and 3' HepG2 liver
10 chr9:711200-720200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
11 chr9:711400-715600 Genic enhancers IMR90 fetal lung fibroblasts Cell Line lung
12 chr9:711600-714800 Genic enhancers Adipose Nuclei Adipose
13 chr9:711600-715200 Strong transcription Primary hematopoietic stem cells short term culture blood
14 chr9:712000-720200 Weak transcription Small Intestine intestine
15 chr9:712000-731600 Weak transcription Primary T helper naive cells fromperipheralblood blood
16 chr9:712000-734800 Weak transcription Monocytes-CD14+_RO01746 blood
17 chr9:712200-741200 Weak transcription Primary hematopoietic stem cells blood
18 chr9:712400-715400 Weak transcription Primary neutrophils fromperipheralblood blood
19 chr9:712400-720200 Weak transcription ES-I3 Cell Line embryonic stem cell
20 chr9:712400-720200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
21 chr9:712400-720200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
22 chr9:712600-714600 Genic enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
23 chr9:712800-715000 Transcr. at gene 5' and 3' Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
24 chr9:712800-715400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
25 chr9:712800-716000 Genic enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
26 chr9:712800-720200 Weak transcription iPS-15b Cell Line embryonic stem cell
27 chr9:712800-740400 Weak transcription Pancreatic Islets Pancreatic Islet
28 chr9:713000-714600 Weak transcription Duodenum Smooth Muscle Duodenum
29 chr9:713000-715200 Weak transcription Primary T cells from cord blood blood
30 chr9:713000-719400 Weak transcription iPS-20b Cell Line embryonic stem cell
31 chr9:713000-719800 Weak transcription HUES64 Cell Line embryonic stem cell
32 chr9:713000-720200 Weak transcription iPS-18 Cell Line embryonic stem cell
33 chr9:713000-720200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
34 chr9:713000-740400 Weak transcription Spleen Spleen
35 chr9:713000-740600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
36 chr9:713000-743400 Weak transcription Thymus Thymus
37 chr9:713200-714600 Weak transcription Fetal Kidney kidney
38 chr9:713200-715000 Strong transcription Esophagus oesophagus
39 chr9:713200-715400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
40 chr9:713200-715400 Weak transcription NH-A brain
41 chr9:713200-716600 Genic enhancers Liver Liver
42 chr9:713200-717400 Enhancers Fetal Brain Male brain
43 chr9:713200-719800 Weak transcription H1 Cell Line embryonic stem cell
44 chr9:713200-719800 Weak transcription HUES48 Cell Line embryonic stem cell
45 chr9:713400-714600 Weak transcription Fetal Adrenal Gland Adrenal Gland
46 chr9:713400-714600 Weak transcription Placenta Amnion Placenta Amnion
47 chr9:713400-714800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
48 chr9:713400-714800 Weak transcription Rectal Mucosa Donor 29 rectum
49 chr9:713400-715200 Genic enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
50 chr9:713400-715600 Enhancers Ovary ovary

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