Variant report

Variant rs12686355
Chromosome Location chr9:71362396-71362397
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:71343400-71363000 Weak transcription GM12878-XiMat blood
2 chr9:71351000-71370600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr9:71352400-71365800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
4 chr9:71355000-71364400 Weak transcription iPS-18 Cell Line embryonic stem cell
5 chr9:71355000-71365400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
6 chr9:71355600-71364200 Weak transcription Primary neutrophils fromperipheralblood blood
7 chr9:71356200-71362400 Genic enhancers Fetal Intestine Small intestine
8 chr9:71356200-71364800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr9:71356800-71362800 Weak transcription Small Intestine intestine
10 chr9:71357200-71363400 Strong transcription Primary B cells from peripheral blood blood
11 chr9:71357800-71362600 Strong transcription Primary B cells from cord blood blood
12 chr9:71358800-71362400 Enhancers Fetal Heart heart
13 chr9:71359800-71362800 Enhancers Stomach Mucosa stomach
14 chr9:71360000-71370600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
15 chr9:71360200-71365400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
16 chr9:71360200-71370600 Weak transcription H9 Cell Line embryonic stem cell
17 chr9:71360600-71364000 Weak transcription HepG2 liver
18 chr9:71361200-71362400 Enhancers Placenta Placenta
19 chr9:71361200-71363200 Enhancers Fetal Intestine Large intestine
20 chr9:71361400-71362400 Enhancers Breast Myoepithelial Primary Cells Breast
21 chr9:71361400-71362600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
22 chr9:71361400-71363200 Enhancers Brain Germinal Matrix brain
23 chr9:71361400-71363400 Enhancers Rectal Mucosa Donor 31 rectum
24 chr9:71361600-71362400 Flanking Active TSS Duodenum Mucosa Duodenum
25 chr9:71361600-71364400 Weak transcription Brain Angular Gyrus brain
26 chr9:71361800-71362400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
27 chr9:71361800-71362400 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
28 chr9:71361800-71362400 Flanking Active TSS NHEK skin
29 chr9:71362000-71362400 Active TSS Colon Smooth Muscle Colon
30 chr9:71362000-71362400 Active TSS HMEC breast
31 chr9:71362000-71363000 Enhancers Rectal Mucosa Donor 29 rectum
32 chr9:71362000-71364000 Weak transcription Placenta Amnion Placenta Amnion
33 chr9:71362000-71364400 Weak transcription Primary hematopoietic stem cells blood
34 chr9:71362000-71365800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
35 chr9:71362200-71362600 Active TSS K562 blood
36 chr9:71362200-71364000 Weak transcription Right Ventricle heart
37 chr9:71362200-71364200 Weak transcription Right Atrium heart
38 chr9:71362200-71365600 Weak transcription Gastric stomach
39 chr9:71362200-71365800 Weak transcription Sigmoid Colon Sigmoid Colon
40 chr9:71362200-71370600 Weak transcription Left Ventricle heart

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