Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:145363081..145365458-chr7:145367883..145369535,2	K562	blood:

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs10227448	0.83[ASN][1000 genomes]
rs10228710	0.83[ASN][1000 genomes]
rs10237200	0.83[ASN][1000 genomes]
rs10257499	0.81[ASN][1000 genomes]
rs10266218	0.82[ASN][1000 genomes]
rs10952624	0.82[ASN][1000 genomes]
rs11761238	0.83[ASN][1000 genomes]
rs12535408	0.82[ASN][1000 genomes]
rs12666398	0.95[CHB][hapmap];0.95[JPT][hapmap];0.90[ASN][1000 genomes]
rs12703732	0.85[AFR][1000 genomes];0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1468582	0.82[ASN][1000 genomes]
rs2191275	0.82[ASN][1000 genomes]
rs2372057	0.82[ASN][1000 genomes]
rs4725678	0.91[ASN][1000 genomes]
rs6951436	0.83[ASN][1000 genomes]
rs6954940	0.80[JPT][hapmap]
rs6961951	0.82[ASN][1000 genomes]
rs6962101	0.82[ASN][1000 genomes]
rs6964127	0.83[ASN][1000 genomes]
rs6966867	0.83[ASN][1000 genomes]
rs6979892	0.82[ASN][1000 genomes]
rs850570	0.91[CHB][hapmap]
rs9640455	0.80[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv889381	chr7:145252217-145379895	Active TSS Enhancers Bivalent Enhancer Flanking Active TSS Weak transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	nsv831180	chr7:145263906-145425845	ZNF genes & repeats Enhancers Active TSS Genic enhancers Weak transcription Bivalent Enhancer Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
3	nsv889382	chr7:145286533-145379895	Active TSS Bivalent Enhancer Enhancers Weak transcription Flanking Active TSS	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
4	esv2754040	chr7:145303352-145698352	Enhancers Weak transcription Active TSS Bivalent Enhancer Genic enhancers Flanking Active TSS Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
5	esv2755386	chr7:145303352-145698352	Genic enhancers Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Active TSS Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs12703731	TAS2R5	cis	cerebellum	SCAN

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:145362000-145365000	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
2	chr7:145362200-145366000	Weak transcription	Fetal Lung	lung

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