Variant report

Variant	rs12726257
Chromosome Location	chr1:220629876-220629877
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs10495148	0.83[YRI][hapmap]
rs12025515	0.86[CHB][hapmap];0.90[JPT][hapmap]
rs12032166	0.90[CHB][hapmap];0.95[JPT][hapmap]
rs12123146	0.89[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12405059	1.00[CEU][hapmap];0.90[JPT][hapmap];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12407585	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12407611	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12568419	1.00[CEU][hapmap];0.80[CHB][hapmap];0.91[JPT][hapmap];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs17008033	0.83[YRI][hapmap]
rs17008084	0.83[YRI][hapmap]
rs17008159	0.83[YRI][hapmap]
rs3849283	0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4354541	0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6670387	0.83[YRI][hapmap]
rs7523054	0.83[YRI][hapmap]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:220629000-220630000	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr1:220629000-220630000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
3	chr1:220629600-220631400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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