The 2.0 version of rSNPBase

Variant report

Variant rs12736004
Chromosome Location chr1:85901367-85901368
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:29 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:85874000-85903800 Weak transcription NHLF lung
2 chr1:85874200-85903600 Weak transcription Muscle Satellite Cultured Cells --
3 chr1:85874400-85903600 Weak transcription HepG2 liver
4 chr1:85874400-85904200 Weak transcription NH-A brain
5 chr1:85886400-85903800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
6 chr1:85886400-85914200 Weak transcription HSMMtube muscle
7 chr1:85886800-85903800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
8 chr1:85887600-85902200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
9 chr1:85887600-85903400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
10 chr1:85890400-85902200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
11 chr1:85892200-85906200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
12 chr1:85893800-85906200 Weak transcription Rectal Smooth Muscle rectum
13 chr1:85893800-85916800 Weak transcription Breast Myoepithelial Primary Cells Breast
14 chr1:85894400-85903600 Weak transcription Skeletal Muscle Female skeletal muscle
15 chr1:85894600-85903600 Weak transcription Adipose Nuclei Adipose
16 chr1:85894600-85903800 Weak transcription HUVEC blood vessel
17 chr1:85894600-85904200 Weak transcription Fetal Intestine Small intestine
18 chr1:85897000-85904200 Weak transcription Fetal Intestine Large intestine
19 chr1:85897800-85904200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
20 chr1:85897800-85904800 Weak transcription Cortex derived primary cultured neurospheres brain
21 chr1:85898000-85902200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
22 chr1:85898200-85903600 Weak transcription Liver Liver
23 chr1:85899200-85902000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
24 chr1:85899200-85902200 Weak transcription Osteobl bone
25 chr1:85899200-85903600 Weak transcription NHDF-Ad bronchial
26 chr1:85899200-85914800 Weak transcription Esophagus oesophagus
27 chr1:85899400-85902200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
28 chr1:85899400-85903600 Weak transcription HSMM muscle
29 chr1:85901200-85901400 Enhancers iPS-20b Cell Line embryonic stem cell

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Last update: Aug 31, 2015