The 2.0 version of rSNPBase

Variant report

Variant rs12815367
Chromosome Location chr12:51547302-51547303
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:69 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:51477800-51550200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr12:51503200-51560200 Weak transcription Right Ventricle heart
3 chr12:51504800-51563400 Weak transcription Primary T killer memory cells from peripheral blood blood
4 chr12:51510200-51554400 Weak transcription K562 blood
5 chr12:51511400-51558800 Weak transcription Primary T helper naive cells from peripheral blood blood
6 chr12:51513000-51565400 Weak transcription Fetal Lung lung
7 chr12:51517200-51547600 Weak transcription Fetal Kidney kidney
8 chr12:51517200-51554600 Weak transcription HepG2 liver
9 chr12:51519000-51561600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
10 chr12:51519000-51565000 Weak transcription Colon Smooth Muscle Colon
11 chr12:51519000-51565200 Weak transcription Left Ventricle heart
12 chr12:51519000-51565200 Weak transcription Pancreas Pancrea
13 chr12:51519000-51565800 Weak transcription Esophagus oesophagus
14 chr12:51519200-51554600 Weak transcription NHDF-Ad bronchial
15 chr12:51519200-51559600 Weak transcription Lung lung
16 chr12:51519200-51563800 Weak transcription Fetal Brain Female brain
17 chr12:51519200-51565000 Weak transcription Stomach Smooth Muscle stomach
18 chr12:51519400-51550200 Weak transcription HUES64 Cell Line embryonic stem cell
19 chr12:51519400-51565200 Weak transcription HUES6 Cell Line embryonic stem cell
20 chr12:51521600-51565200 Weak transcription HSMM muscle
21 chr12:51526000-51558800 Weak transcription GM12878-XiMat blood
22 chr12:51526800-51556400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
23 chr12:51527400-51565200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
24 chr12:51528200-51554600 Weak transcription A549 lung
25 chr12:51530600-51564200 Weak transcription Fetal Muscle Leg muscle
26 chr12:51531200-51563400 Weak transcription Hela-S3 cervix
27 chr12:51531800-51550200 Weak transcription NHEK skin
28 chr12:51531800-51554400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
29 chr12:51532000-51565000 Weak transcription Rectal Mucosa Donor 31 rectum
30 chr12:51532200-51550000 Weak transcription Primary T helper cells fromperipheralblood blood
31 chr12:51532400-51564000 Weak transcription Primary T cells from cord blood blood
32 chr12:51532600-51554400 Weak transcription Brain Angular Gyrus brain
33 chr12:51532600-51562000 Weak transcription Ovary ovary
34 chr12:51532600-51562800 Weak transcription Primary T regulatory cells fromperipheralblood blood
35 chr12:51532600-51564800 Weak transcription Breast Myoepithelial Primary Cells Breast
36 chr12:51532600-51565200 Weak transcription Sigmoid Colon Sigmoid Colon
37 chr12:51532800-51563600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
38 chr12:51533000-51554600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
39 chr12:51533000-51563200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
40 chr12:51533200-51555800 Weak transcription Fetal Adrenal Gland Adrenal Gland
41 chr12:51533200-51561400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
42 chr12:51533200-51561400 Weak transcription Placenta Placenta
43 chr12:51533200-51564800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
44 chr12:51533400-51553600 Weak transcription Primary hematopoietic stem cells short term culture blood
45 chr12:51533400-51560200 Weak transcription Dnd41 blood
46 chr12:51533600-51564800 Weak transcription Primary hematopoietic stem cells blood
47 chr12:51533600-51565000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
48 chr12:51534600-51564200 Weak transcription Fetal Intestine Large intestine
49 chr12:51537000-51550200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
50 chr12:51538600-51554200 Weak transcription Monocytes-CD14+_RO01746 blood

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Last update: Aug 31, 2015