Variant report

Variant	rs12817655
Chromosome Location	chr12:63132189-63132190
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:9)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

(count:9 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr12:63129972..63133446-chr12:63133906..63136834,3	MCF-7	breast:
2	chr12:63125401..63128533-chr12:63129737..63133107,4	K562	blood:
3	chr12:63129686..63132741-chr12:63143731..63146913,3	MCF-7	breast:
4	chr12:63125401..63128193-chr12:63129973..63133107,3	K562	blood:
5	chr12:63124068..63127843-chr12:63129952..63132671,4	MCF-7	breast:
6	chr12:63132087..63132833-chr15:66007082..66007649,2	MCF-7	breast:
7	chr12:63131148..63134092-chr12:63139038..63140711,2	K562	blood:
8	chr12:63131446..63134061-chr12:63135870..63138526,3	K562	blood:
9	chr12:63131484..63133718-chr12:63162471..63164846,2	MCF-7	breast:

No data

rs_ID	r²[population]
rs10506447	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12820859	0.83[ASN][1000 genomes]
rs61919557	0.91[AMR][1000 genomes]

Chromatin state (count:78 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:63096600-63157000	Weak transcription	Pancreas	Pancrea
2	chr12:63121800-63133200	Strong transcription	HepG2	liver
3	chr12:63123000-63152000	Weak transcription	Gastric	stomach
4	chr12:63123200-63137400	Weak transcription	Primary neutrophils fromperipheralblood	blood
5	chr12:63123600-63132400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
6	chr12:63124200-63145400	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
7	chr12:63125200-63132400	Weak transcription	Brain Cingulate Gyrus	brain
8	chr12:63125400-63132200	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
9	chr12:63125600-63138400	Weak transcription	Primary hematopoietic stem cells	blood
10	chr12:63125800-63132200	Weak transcription	Brain Substantia Nigra	brain
11	chr12:63125800-63133600	Weak transcription	Fetal Kidney	kidney
12	chr12:63125800-63143000	Weak transcription	Psoas Muscle	Psoas
13	chr12:63126000-63132400	Weak transcription	Fetal Muscle Trunk	muscle
14	chr12:63126000-63132800	Weak transcription	Brain Hippocampus Middle	brain
15	chr12:63126000-63133000	Weak transcription	Brain Anterior Caudate	brain
16	chr12:63126000-63133000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
17	chr12:63126000-63133600	Weak transcription	Adipose Nuclei	Adipose
18	chr12:63126000-63138400	Weak transcription	Left Ventricle	heart
19	chr12:63126000-63149200	Weak transcription	Lung	lung
20	chr12:63126200-63132400	Weak transcription	Ovary	ovary
21	chr12:63126200-63133000	Weak transcription	Skeletal Muscle Female	skeletal muscle
22	chr12:63126200-63133200	Weak transcription	Fetal Stomach	stomach
23	chr12:63126200-63133200	Weak transcription	Right Atrium	heart
24	chr12:63126200-63138600	Weak transcription	Skeletal Muscle Male	skeletal muscle
25	chr12:63126200-63155600	Weak transcription	Aorta	Aorta
26	chr12:63126400-63133600	Weak transcription	Stomach Smooth Muscle	stomach
27	chr12:63126800-63132200	Weak transcription	Brain Angular Gyrus	brain
28	chr12:63127200-63132200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
29	chr12:63127200-63133200	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
30	chr12:63127600-63134400	Enhancers	A549	lung
31	chr12:63127600-63137800	Weak transcription	Primary monocytes fromperipheralblood	blood
32	chr12:63128400-63133000	Enhancers	Fetal Thymus	thymus
33	chr12:63129400-63132600	Enhancers	HMEC	breast
34	chr12:63130000-63138400	Weak transcription	Primary hematopoietic stem cells short term culture	blood
35	chr12:63130200-63153200	Weak transcription	Fetal Intestine Large	intestine
36	chr12:63130400-63132200	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
37	chr12:63130600-63132200	Weak transcription	Liver	Liver
38	chr12:63131000-63132600	Enhancers	Brain Inferior Temporal Lobe	brain
39	chr12:63131200-63132600	Enhancers	H1 Cell Line	embryonic stem cell
40	chr12:63131200-63132600	Enhancers	Fetal Brain Female	brain
41	chr12:63131200-63133200	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
42	chr12:63131200-63133800	Enhancers	HSMMtube	muscle
43	chr12:63131200-63134200	Enhancers	Fetal Muscle Leg	muscle
44	chr12:63131400-63132400	Enhancers	NHDF-Ad	bronchial
45	chr12:63131400-63138200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
46	chr12:63131400-63138400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
47	chr12:63131400-63138400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
48	chr12:63131400-63148000	Weak transcription	Fetal Intestine Small	intestine
49	chr12:63131600-63132200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
50	chr12:63131600-63132400	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell

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