Variant report

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs10851524	0.90[ASN][1000 genomes]
rs11070921	0.95[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs11070935	0.80[EUR][1000 genomes]
rs12912619	0.93[AMR][1000 genomes];0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12913472	0.84[EUR][1000 genomes]
rs1899734	0.87[EUR][1000 genomes]
rs1899736	0.88[ASN][1000 genomes]
rs1899738	0.88[ASN][1000 genomes]
rs1899739	0.93[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs1899741	0.87[ASN][1000 genomes]
rs2120447	0.93[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs2165989	0.93[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs2414185	0.87[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs2414186	0.87[ASN][1000 genomes]
rs4776079	0.87[ASN][1000 genomes]
rs6493597	0.84[EUR][1000 genomes]
rs6493598	0.84[EUR][1000 genomes]
rs7166575	0.88[ASN][1000 genomes]
rs8027796	0.88[ASN][1000 genomes]
rs8030817	0.85[EUR][1000 genomes]
rs8032241	0.91[AFR][1000 genomes];0.99[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs8032248	0.91[AFR][1000 genomes];0.99[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv471245	chr15:52607262-53187165	Weak transcription Strong transcription Active TSS Enhancers Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	52 gene(s)	inside rSNPs	diseases
2	nsv1043999	chr15:53162917-53187508	Flanking Bivalent TSS/Enh Weak transcription Enhancers Flanking Active TSS	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:53183600-53185600	Weak transcription	Pancreas	Pancrea

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