Variant report

Variant rs12908421
Chromosome Location chr15:76881794-76881795
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:76871000-76883600 Weak transcription Ovary ovary
2 chr15:76876000-76883600 Weak transcription Aorta Aorta
3 chr15:76877400-76883400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
4 chr15:76878200-76884200 Weak transcription Right Ventricle heart
5 chr15:76878800-76884800 Weak transcription Primary T cells from cord blood blood
6 chr15:76879400-76883400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
7 chr15:76879600-76883400 Weak transcription Monocytes-CD14+_RO01746 blood
8 chr15:76879800-76881800 Weak transcription Liver Liver
9 chr15:76879800-76881800 Weak transcription Duodenum Smooth Muscle Duodenum
10 chr15:76879800-76885600 Weak transcription Pancreas Pancrea
11 chr15:76880200-76883200 Weak transcription Primary hematopoietic stem cells short term culture blood
12 chr15:76880400-76883200 Weak transcription Fetal Adrenal Gland Adrenal Gland
13 chr15:76880400-76883200 Weak transcription Skeletal Muscle Male skeletal muscle
14 chr15:76880400-76883600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
15 chr15:76880600-76883200 Weak transcription Fetal Muscle Trunk muscle
16 chr15:76880600-76883400 Weak transcription Fetal Muscle Leg muscle
17 chr15:76881200-76881800 Enhancers Fetal Intestine Small intestine
18 chr15:76881200-76882000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
19 chr15:76881200-76882000 ZNF genes & repeats Lung lung
20 chr15:76881200-76882400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
21 chr15:76881200-76882400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
22 chr15:76881200-76882400 Enhancers Fetal Intestine Large intestine
23 chr15:76881200-76882400 Strong transcription Fetal Stomach stomach
24 chr15:76881200-76882600 Strong transcription Thymus Thymus
25 chr15:76881400-76881800 Active TSS Colonic Mucosa Colon
26 chr15:76881400-76882000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
27 chr15:76881400-76882200 Enhancers Sigmoid Colon Sigmoid Colon
28 chr15:76881400-76882400 Strong transcription Stomach Smooth Muscle stomach
29 chr15:76881400-76882400 Enhancers NHEK skin
30 chr15:76881600-76881800 Enhancers Duodenum Mucosa Duodenum
31 chr15:76881600-76882000 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
32 chr15:76881600-76882000 ZNF genes & repeats Pancreatic Islets Pancreatic Islet
33 chr15:76881600-76882000 Enhancers Left Ventricle heart
34 chr15:76881600-76882000 Flanking Active TSS Rectal Mucosa Donor 31 rectum
35 chr15:76881600-76882000 Enhancers HepG2 liver
36 chr15:76881600-76882200 Strong transcription Primary mononuclear cells fromperipheralblood Blood
37 chr15:76881600-76882400 Strong transcription Primary B cells from cord blood blood
38 chr15:76881600-76882400 Strong transcription Primary B cells from peripheral blood blood
39 chr15:76881600-76882400 Flanking Active TSS Rectal Mucosa Donor 29 rectum
40 chr15:76881600-76882600 ZNF genes & repeats Esophagus oesophagus
41 chr15:76881600-76883000 Strong transcription Breast Myoepithelial Primary Cells Breast

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