Variant report

Variant	rs12939187
Chromosome Location	chr17:43508223-43508224
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr17:43508103-43509362	GM12892	blood:	n/a	n/a
2	POLR2A	chr17:43508176-43509475	GM18951	blood:	n/a	n/a
3	RUNX3	chr17:43508110-43509235	GM12878	blood:	n/a	n/a
4	MAX	chr17:43507960-43509667	ECC-1	luminal epithelium:	n/a	n/a
5	MAX	chr17:43508075-43509532	MCF-7	breast:	n/a	n/a
6	EP300	chr17:43507972-43509208	ECC-1	luminal epithelium:	n/a	chr17:43508438-43508454 chr17:43508418-43508427 chr17:43508679-43508686 chr17:43508950-43508959
7	POLR2A	chr17:43508075-43508537	GM12878	blood:	n/a	n/a
8	MAX	chr17:43508060-43509374	ECC-1	luminal epithelium:	n/a	n/a
9	SPI1	chr17:43508156-43508449	GM12891	blood:	n/a	n/a
10	POLR2A	chr17:43508138-43509344	GM18505	blood:	n/a	n/a
11	SIN3A	chr17:43507914-43509808	H1-hESC	embryonic stem cell:	n/a	n/a
12	IRF4	chr17:43508045-43508457	GM12878	blood:	n/a	n/a
13	TEAD4	chr17:43508114-43508575	ECC-1	luminal epithelium:	n/a	chr17:43508197-43508206
14	HDAC2	chr17:43508142-43508569	MCF-7	breast:	n/a	n/a
15	BHLHE40	chr17:43508170-43508437	GM12878	blood:	n/a	n/a
16	POLR2A	chr17:43508161-43508354	MCF-7	breast:	n/a	n/a
17	RCOR1	chr17:43508159-43508329	GM12878	blood:	n/a	n/a
18	NR2F2	chr17:43508043-43509586	MCF-7	breast:	n/a	n/a
19	TCF12	chr17:43507914-43509354	ECC-1	luminal epithelium:	n/a	chr17:43508456-43508466
20	MTA3	chr17:43507955-43509227	GM12878	blood:	n/a	n/a
21	SP1	chr17:43508017-43508488	H1-hESC	embryonic stem cell:	n/a	n/a
22	MAZ	chr17:43508134-43509349	GM12878	blood:	n/a	n/a
23	FOXA1	chr17:43508206-43508536	T-47D	breast:	n/a	n/a
24	POLR2A	chr17:43508169-43509434	GM15510	blood:	n/a	n/a
25	SPI1	chr17:43508126-43508402	GM12878	blood:	n/a	chr17:43508152-43508165
26	TCF12	chr17:43508151-43508394	GM12878	blood:	n/a	n/a
27	CHD2	chr17:43508191-43508332	GM12878	blood:	n/a	n/a
28	SIN3AK20	chr17:43507950-43509626	MCF-7	breast:	n/a	n/a
29	ZBTB7A	chr17:43507932-43509271	ECC-1	luminal epithelium:	n/a	chr17:43508799-43508807 chr17:43508951-43508960
30	TBL1XR1	chr17:43508119-43508308	GM12878	blood:	n/a	n/a
31	TEAD4	chr17:43508052-43508450	H1-hESC	embryonic stem cell:	n/a	chr17:43508197-43508206
32	ZBTB7A	chr17:43507830-43509221	ECC-1	luminal epithelium:	n/a	chr17:43508799-43508807 chr17:43508951-43508960
33	EP300	chr17:43508012-43508522	T-47D	breast:	n/a	chr17:43508438-43508454 chr17:43508418-43508427
34	RUNX3	chr17:43508129-43509101	GM12878	blood:	n/a	n/a
35	POLR2A	chr17:43508095-43509354	GM19193	blood:	n/a	n/a
36	MXI1	chr17:43508192-43509212	GM12878	blood:	n/a	chr17:43508456-43508465
37	POLR2A	chr17:43508129-43509430	GM19099	blood:	n/a	n/a
38	TAF1	chr17:43508143-43509642	ECC-1	luminal epithelium:	n/a	n/a
39	ELF1	chr17:43508131-43509223	MCF-7	breast:	n/a	chr17:43508674-43508687 chr17:43508720-43508733 chr17:43509027-43509039 chr17:43508886-43508895 chr17:43508676-43508687
40	POLR2A	chr17:43508002-43509670	ECC-1	luminal epithelium:	n/a	n/a

No.	Distal block	Cell Line	Cell type
1	chr17:43491389..43493065-chr17:43507690..43509408,2	MCF-7	breast:
2	chr17:43506157..43512040-chr17:43512446..43519071,9	MCF-7	breast:
3	chr17:43209603..43212111-chr17:43507781..43510715,2	MCF-7	breast:
4	chr17:43392748..43395786-chr17:43508112..43511111,3	MCF-7	breast:
5	chr17:43501715..43503974-chr17:43507657..43510348,3	MCF-7	breast:
6	chr17:43507001..43509385-chr17:43510815..43513693,2	K562	blood:
7	chr17:43507648..43509676-chr17:43511432..43515176,4	K562	blood:

Variant related genes	Relation type
ARHGAP27	TF binding region
ENSG00000181513	Chromatin interaction
ENSG00000161714	Chromatin interaction
ENSG00000159314	Chromatin interaction
ENSG00000225190	Chromatin interaction
ENSG00000006062	Chromatin interaction

Extended variants
information (count: 409 )
Associated
traits (count: 6 )

rSNPs within LD-proxies of this variant (count:358)

rs_ID	r²[population]
rs11012	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1105569	1.00[ASN][1000 genomes]
rs1105570	1.00[ASN][1000 genomes]
rs1105571	1.00[ASN][1000 genomes]
rs12452273	0.89[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12940792	0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12942666	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12942951	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12946723	0.82[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs12946900	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12947718	0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12949256	0.82[EUR][1000 genomes]
rs12950965	0.87[AFR][1000 genomes];0.84[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12952504	0.90[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs12952764	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1568949	1.00[ASN][1000 genomes]
rs1568950	1.00[ASN][1000 genomes]
rs1568951	1.00[ASN][1000 genomes]
rs16940633	1.00[ASN][1000 genomes]
rs1706748	1.00[ASN][1000 genomes]
rs17631303	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17631676	0.87[AFR][1000 genomes];0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17686610	1.00[ASN][1000 genomes]
rs17687462	1.00[ASN][1000 genomes]
rs17687504	1.00[ASN][1000 genomes]
rs17687534	1.00[ASN][1000 genomes]
rs17687571	1.00[ASN][1000 genomes]
rs17687625	1.00[ASN][1000 genomes]
rs17687667	1.00[ASN][1000 genomes]
rs17687740	1.00[ASN][1000 genomes]
rs17687838	1.00[ASN][1000 genomes]
rs17687849	1.00[ASN][1000 genomes]
rs17688002	1.00[ASN][1000 genomes]
rs17688032	1.00[ASN][1000 genomes]
rs17688056	1.00[ASN][1000 genomes]
rs17688068	1.00[ASN][1000 genomes]
rs17688090	1.00[ASN][1000 genomes]
rs17688126	1.00[ASN][1000 genomes]
rs17688205	1.00[ASN][1000 genomes]
rs17688249	1.00[ASN][1000 genomes]
rs17688296	1.00[ASN][1000 genomes]
rs17688767	1.00[ASN][1000 genomes]
rs17688773	1.00[ASN][1000 genomes]
rs17688875	1.00[ASN][1000 genomes]
rs17688916	1.00[ASN][1000 genomes]
rs17688922	1.00[ASN][1000 genomes]
rs17688944	1.00[ASN][1000 genomes]
rs17689104	1.00[ASN][1000 genomes]
rs17689116	1.00[ASN][1000 genomes]
rs17689182	1.00[ASN][1000 genomes]
rs17689218	1.00[ASN][1000 genomes]
rs17760577	1.00[ASN][1000 genomes]
rs17760631	1.00[ASN][1000 genomes]
rs17760733	1.00[ASN][1000 genomes]
rs17760817	1.00[ASN][1000 genomes]
rs17761046	1.00[ASN][1000 genomes]
rs17761100	1.00[ASN][1000 genomes]
rs17761124	1.00[ASN][1000 genomes]
rs17761207	1.00[ASN][1000 genomes]
rs17761387	1.00[ASN][1000 genomes]
rs17761581	1.00[ASN][1000 genomes]
rs17762073	1.00[ASN][1000 genomes]
rs17762165	1.00[ASN][1000 genomes]
rs17762308	1.00[ASN][1000 genomes]
rs17762361	1.00[ASN][1000 genomes]
rs17762535	1.00[ASN][1000 genomes]
rs1808189	0.87[EUR][1000 genomes]
rs1879581	0.87[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1879582	1.00[ASN][1000 genomes]
rs1879583	0.81[EUR][1000 genomes]
rs1879585	0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1879586	1.00[ASN][1000 genomes]
rs1880749	1.00[ASN][1000 genomes]
rs1880750	1.00[ASN][1000 genomes]
rs1971374	1.00[ASN][1000 genomes]
rs2028078	0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2077606	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2090847	0.82[AFR][1000 genomes];0.88[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2139890	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2253488	1.00[ASN][1000 genomes]
rs241020	1.00[ASN][1000 genomes]
rs241021	1.00[ASN][1000 genomes]
rs241028	1.00[ASN][1000 genomes]
rs241032	1.00[ASN][1000 genomes]
rs241033	1.00[ASN][1000 genomes]
rs241041	1.00[ASN][1000 genomes]
rs2458179	1.00[ASN][1000 genomes]
rs2458187	1.00[ASN][1000 genomes]
rs2462835	1.00[ASN][1000 genomes]
rs2463523	1.00[ASN][1000 genomes]
rs2668644	1.00[ASN][1000 genomes]
rs2684526	1.00[ASN][1000 genomes]
rs2693359	1.00[ASN][1000 genomes]
rs2693362	1.00[ASN][1000 genomes]
rs2942164	1.00[ASN][1000 genomes]
rs2942165	1.00[ASN][1000 genomes]
rs2942166	1.00[ASN][1000 genomes]
rs2942167	1.00[ASN][1000 genomes]
rs2942168	1.00[ASN][1000 genomes]
rs2942169	1.00[ASN][1000 genomes]
rs2942170	1.00[ASN][1000 genomes]
rs2959992	1.00[ASN][1000 genomes]
rs2960000	0.84[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3108317	1.00[ASN][1000 genomes]
rs34018943	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34063617	0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34104358	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3418	1.00[ASN][1000 genomes]
rs34286926	0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34363898	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34465449	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34792542	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34887474	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34915103	0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35327136	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35389313	0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35489312	0.82[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35519908	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35626715	0.92[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs35884427	0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs36078910	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs36114997	0.82[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs365825	1.00[ASN][1000 genomes]
rs383241	1.00[ASN][1000 genomes]
rs385691	1.00[ASN][1000 genomes]
rs389217	1.00[ASN][1000 genomes]
rs389978	1.00[ASN][1000 genomes]
rs392116	1.00[ASN][1000 genomes]
rs393152	1.00[ASN][1000 genomes]
rs393675	1.00[ASN][1000 genomes]
rs393838	1.00[ASN][1000 genomes]
rs3946526	0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs396593	1.00[ASN][1000 genomes]
rs3972613	1.00[ASN][1000 genomes]
rs413778	1.00[ASN][1000 genomes]
rs413917	1.00[ASN][1000 genomes]
rs422112	1.00[ASN][1000 genomes]
rs424243	1.00[ASN][1000 genomes]
rs434428	1.00[ASN][1000 genomes]
rs434598	1.00[ASN][1000 genomes]
rs434805	1.00[ASN][1000 genomes]
rs434971	1.00[ASN][1000 genomes]
rs439558	1.00[ASN][1000 genomes]
rs4401083	1.00[ASN][1000 genomes]
rs4479288	1.00[ASN][1000 genomes]
rs4479289	1.00[ASN][1000 genomes]
rs448830	1.00[ASN][1000 genomes]
rs4605208	1.00[ASN][1000 genomes]
rs4609898	1.00[ASN][1000 genomes]
rs4763	0.90[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs5026246	1.00[ASN][1000 genomes]
rs55642947	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55643511	0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55648326	0.86[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55651627	1.00[ASN][1000 genomes]
rs55652155	0.87[AFR][1000 genomes];0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55653963	1.00[ASN][1000 genomes]
rs55663797	0.87[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55669046	1.00[ASN][1000 genomes]
rs55671319	0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55688739	1.00[ASN][1000 genomes]
rs55703888	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55746869	0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55787734	1.00[ASN][1000 genomes]
rs55790407	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55793500	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55849973	1.00[ASN][1000 genomes]
rs55896111	1.00[ASN][1000 genomes]
rs55914643	0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55925547	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55962674	1.00[ASN][1000 genomes]
rs55972157	1.00[ASN][1000 genomes]
rs55973918	1.00[ASN][1000 genomes]
rs55974014	1.00[ASN][1000 genomes]
rs55980621	1.00[ASN][1000 genomes]
rs55989971	1.00[ASN][1000 genomes]
rs56005713	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56015792	0.87[AFR][1000 genomes];0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56020833	0.96[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs56046792	1.00[ASN][1000 genomes]
rs56062621	1.00[ASN][1000 genomes]
rs56100013	1.00[ASN][1000 genomes]
rs56110538	1.00[ASN][1000 genomes]
rs56159231	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56160448	1.00[ASN][1000 genomes]
rs56167344	1.00[ASN][1000 genomes]
rs56167560	1.00[ASN][1000 genomes]
rs56168933	0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56192752	0.87[AFR][1000 genomes];0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56205560	1.00[ASN][1000 genomes]
rs56212100	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56220242	1.00[ASN][1000 genomes]
rs56220387	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56236914	0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56323722	1.00[ASN][1000 genomes]
rs56323832	1.00[ASN][1000 genomes]
rs56328224	1.00[ASN][1000 genomes]
rs56378631	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56380663	1.00[ASN][1000 genomes]
rs56397077	1.00[ASN][1000 genomes]
rs56400821	1.00[ASN][1000 genomes]
rs56406407	1.00[ASN][1000 genomes]
rs593720	1.00[ASN][1000 genomes]
rs61667602	1.00[ASN][1000 genomes]
rs62053939	1.00[ASN][1000 genomes]
rs62053940	1.00[ASN][1000 genomes]
rs62053943	1.00[ASN][1000 genomes]
rs62053945	1.00[ASN][1000 genomes]
rs62053946	1.00[ASN][1000 genomes]
rs62053947	1.00[ASN][1000 genomes]
rs62053948	1.00[ASN][1000 genomes]
rs62053949	1.00[ASN][1000 genomes]
rs62053950	1.00[ASN][1000 genomes]
rs62053951	1.00[ASN][1000 genomes]
rs62053952	1.00[ASN][1000 genomes]
rs62053953	1.00[ASN][1000 genomes]
rs62053954	1.00[ASN][1000 genomes]
rs62053955	1.00[ASN][1000 genomes]
rs62053956	1.00[ASN][1000 genomes]
rs62053957	1.00[ASN][1000 genomes]
rs62053958	1.00[ASN][1000 genomes]
rs62053959	1.00[ASN][1000 genomes]
rs62054372	1.00[ASN][1000 genomes]
rs62054378	1.00[ASN][1000 genomes]
rs62054384	1.00[ASN][1000 genomes]
rs62054387	1.00[ASN][1000 genomes]
rs62054388	1.00[ASN][1000 genomes]
rs62055660	1.00[ASN][1000 genomes]
rs62055661	1.00[ASN][1000 genomes]
rs62055662	1.00[ASN][1000 genomes]
rs62055663	1.00[ASN][1000 genomes]
rs62055664	1.00[ASN][1000 genomes]
rs62055665	1.00[ASN][1000 genomes]
rs62055689	1.00[ASN][1000 genomes]
rs62055691	1.00[ASN][1000 genomes]
rs62055692	1.00[ASN][1000 genomes]
rs62055693	1.00[ASN][1000 genomes]
rs62055696	1.00[ASN][1000 genomes]
rs62055697	1.00[ASN][1000 genomes]
rs62055698	1.00[ASN][1000 genomes]
rs62055700	1.00[ASN][1000 genomes]
rs62055701	1.00[ASN][1000 genomes]
rs62055702	1.00[ASN][1000 genomes]
rs62055704	1.00[ASN][1000 genomes]
rs62055705	1.00[ASN][1000 genomes]
rs62055707	1.00[ASN][1000 genomes]
rs62055708	1.00[ASN][1000 genomes]
rs62055709	1.00[ASN][1000 genomes]
rs62055710	1.00[ASN][1000 genomes]
rs62055712	1.00[ASN][1000 genomes]
rs62055713	1.00[ASN][1000 genomes]
rs62055714	1.00[ASN][1000 genomes]
rs62055715	1.00[ASN][1000 genomes]
rs62055716	1.00[ASN][1000 genomes]
rs62055717	1.00[ASN][1000 genomes]
rs62055751	1.00[ASN][1000 genomes]
rs62055752	1.00[ASN][1000 genomes]
rs62055753	1.00[ASN][1000 genomes]
rs62055754	1.00[ASN][1000 genomes]
rs62056874	1.00[ASN][1000 genomes]
rs62056875	1.00[ASN][1000 genomes]
rs62056876	1.00[ASN][1000 genomes]
rs62056877	1.00[ASN][1000 genomes]
rs62056878	1.00[ASN][1000 genomes]
rs62056879	1.00[ASN][1000 genomes]
rs62056880	1.00[ASN][1000 genomes]
rs62056881	1.00[ASN][1000 genomes]
rs62056905	1.00[ASN][1000 genomes]
rs62056906	1.00[ASN][1000 genomes]
rs62056908	1.00[ASN][1000 genomes]
rs62056909	1.00[ASN][1000 genomes]
rs62056910	1.00[ASN][1000 genomes]
rs62056911	1.00[ASN][1000 genomes]
rs62056912	1.00[ASN][1000 genomes]
rs62056913	1.00[ASN][1000 genomes]
rs62056915	1.00[ASN][1000 genomes]
rs62056916	1.00[ASN][1000 genomes]
rs62056917	1.00[ASN][1000 genomes]
rs62056918	1.00[ASN][1000 genomes]
rs62056919	1.00[ASN][1000 genomes]
rs62056920	1.00[ASN][1000 genomes]
rs62056921	1.00[ASN][1000 genomes]
rs62056922	1.00[ASN][1000 genomes]
rs62056925	1.00[ASN][1000 genomes]
rs62056926	1.00[ASN][1000 genomes]
rs62056927	1.00[ASN][1000 genomes]
rs62056928	1.00[ASN][1000 genomes]
rs62056929	1.00[ASN][1000 genomes]
rs62056930	1.00[ASN][1000 genomes]
rs62056931	1.00[ASN][1000 genomes]
rs62056932	1.00[ASN][1000 genomes]
rs62056933	1.00[ASN][1000 genomes]
rs62056934	1.00[ASN][1000 genomes]
rs62056935	1.00[ASN][1000 genomes]
rs62056936	1.00[ASN][1000 genomes]
rs62056937	1.00[ASN][1000 genomes]
rs62056939	1.00[ASN][1000 genomes]
rs62056940	1.00[ASN][1000 genomes]
rs62056946	1.00[ASN][1000 genomes]
rs62064364	1.00[ASN][1000 genomes]
rs62064597	0.91[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62064598	0.85[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62064600	0.85[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62064603	0.85[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62064637	0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62064641	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62064643	0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62064645	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62064646	0.86[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs62064647	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62064649	0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62064651	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs62064652	0.95[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs62064653	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62064654	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62064655	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62064657	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62065374	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62065376	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62065377	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62065378	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62065379	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62065380	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62065385	0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62065389	0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62065391	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62065392	0.84[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62065393	0.82[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs62065399	0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62065403	0.87[AFR][1000 genomes];0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62065404	0.87[AFR][1000 genomes];0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62065436	0.88[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62065437	0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62065438	0.88[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62065441	0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62065442	0.88[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62065444	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62065445	0.88[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62065447	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62065448	0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62065449	0.86[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62065452	1.00[ASN][1000 genomes]
rs62065453	1.00[ASN][1000 genomes]
rs62065459	1.00[ASN][1000 genomes]
rs62066128	1.00[ASN][1000 genomes]
rs62066460	1.00[ASN][1000 genomes]
rs71238846	0.87[AFR][1000 genomes];0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs71373560	0.95[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs71373572	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7209501	0.84[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7220206	1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7222389	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7222444	0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73984391	0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7502718	1.00[ASN][1000 genomes]
rs7502937	1.00[ASN][1000 genomes]
rs8071011	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs9730	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:51 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv431632	chr17:43199763-43733983	Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' Active TSS Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	210 gene(s)	inside rSNPs	diseases
2	nsv431633	chr17:43199763-43772540	Enhancers Flanking Active TSS Strong transcription Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Weak transcription Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	210 gene(s)	inside rSNPs	diseases
3	nsv431634	chr17:43346980-43659975	Weak transcription Active TSS Enhancers Genic enhancers Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	56 gene(s)	inside rSNPs	diseases
4	nsv431636	chr17:43403005-43659881	Active TSS Genic enhancers Enhancers Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	39 gene(s)	inside rSNPs	diseases
5	esv2754858	chr17:43403005-43666906	Weak transcription Flanking Bivalent TSS/Enh Enhancers Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Bivalent Enhancer Active TSS Strong transcription ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	44 gene(s)	inside rSNPs	diseases
6	nsv431637	chr17:43403005-43716885	Genic enhancers Strong transcription Enhancers Flanking Active TSS Weak transcription Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	49 gene(s)	inside rSNPs	diseases
7	nsv428342	chr17:43443554-43651084	Weak transcription Enhancers Flanking Active TSS Bivalent/Poised TSS Active TSS Strong transcription Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	32 gene(s)	inside rSNPs	diseases
8	esv2757659	chr17:43457886-43733983	Enhancers Flanking Active TSS Genic enhancers Strong transcription Active TSS Weak transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	45 gene(s)	inside rSNPs	diseases
9	esv2758691	chr17:43457886-43816023	Enhancers Flanking Active TSS Genic enhancers Active TSS Weak transcription Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	47 gene(s)	inside rSNPs	diseases
10	esv2755280	chr17:43459697-43666906	Strong transcription Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Enhancers Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	40 gene(s)	inside rSNPs	diseases
11	nsv908304	chr17:43467025-43524511	Enhancers Genic enhancers Flanking Active TSS Strong transcription Bivalent Enhancer Weak transcription Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases
12	nsv1065930	chr17:43467291-44151468	Weak transcription Active TSS Bivalent/Poised TSS Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	51 gene(s)	inside rSNPs	diseases
13	nsv431638	chr17:43470156-43693538	Strong transcription Enhancers Weak transcription Active TSS Bivalent Enhancer Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	41 gene(s)	inside rSNPs	diseases
14	esv2755741	chr17:43470760-43655688	Bivalent/Poised TSS Strong transcription Weak transcription Flanking Active TSS Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	32 gene(s)	inside rSNPs	diseases
15	nsv431639	chr17:43470760-43659355	Bivalent Enhancer Enhancers Weak transcription Genic enhancers Active TSS Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	32 gene(s)	inside rSNPs	diseases
16	esv2754089	chr17:43470760-43659881	Enhancers Weak transcription Active TSS Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
17	esv34266	chr17:43470760-43659975	Enhancers Weak transcription Active TSS Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
18	esv34577	chr17:43470760-43659975	Genic enhancers Weak transcription Bivalent/Poised TSS Strong transcription Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
19	esv2752564	chr17:43470760-43659975	Weak transcription Genic enhancers Strong transcription Enhancers Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
20	esv2753343	chr17:43470760-43659975	Enhancers Bivalent Enhancer Strong transcription Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
21	esv2753852	chr17:43470760-43659975	Active TSS Strong transcription Flanking Bivalent TSS/Enh Weak transcription Enhancers Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
22	esv2754692	chr17:43470760-43659975	Weak transcription Flanking Active TSS Enhancers Bivalent Enhancer Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
23	esv2754773	chr17:43470760-43659975	Strong transcription Bivalent Enhancer Enhancers Genic enhancers Weak transcription Flanking Active TSS Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
24	esv2754821	chr17:43470760-43659975	Genic enhancers Strong transcription Enhancers Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
25	esv2755261	chr17:43470760-43659975	Flanking Bivalent TSS/Enh Weak transcription Enhancers Genic enhancers Strong transcription Flanking Active TSS Bivalent Enhancer Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
26	esv2755434	chr17:43470760-43659975	Strong transcription Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
27	esv2755618	chr17:43470760-43659975	Enhancers Flanking Active TSS Weak transcription Strong transcription Active TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
28	esv2756206	chr17:43470760-43659975	Flanking Active TSS Weak transcription Enhancers Active TSS Strong transcription Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
29	esv2756211	chr17:43470760-43659975	Bivalent/Poised TSS Active TSS Strong transcription Flanking Active TSS Enhancers Weak transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
30	esv2756238	chr17:43470760-43659975	Weak transcription Strong transcription Genic enhancers Enhancers Bivalent Enhancer Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
31	esv2756640	chr17:43470760-43659975	Flanking Active TSS Genic enhancers Strong transcription Weak transcription Enhancers Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
32	esv34307	chr17:43470760-43666906	Enhancers Genic enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Strong transcription Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	38 gene(s)	inside rSNPs	diseases
33	esv2755466	chr17:43470760-43666906	Enhancers Flanking Active TSS Active TSS Weak transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	38 gene(s)	inside rSNPs	diseases
34	esv2756448	chr17:43470760-43666906	Weak transcription Strong transcription Enhancers Flanking Active TSS Bivalent Enhancer Active TSS Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	38 gene(s)	inside rSNPs	diseases
35	nsv431640	chr17:43470760-43666906	Weak transcription Enhancers Active TSS Genic enhancers Flanking Bivalent TSS/Enh Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	38 gene(s)	inside rSNPs	diseases
36	esv2753768	chr17:43470760-43734304	Weak transcription Enhancers Flanking Bivalent TSS/Enh Strong transcription Flanking Active TSS Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	43 gene(s)	inside rSNPs	diseases
37	esv2754725	chr17:43470760-43741452	Flanking Active TSS Strong transcription Enhancers Genic enhancers Weak transcription Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	43 gene(s)	inside rSNPs	diseases
38	esv2752397	chr17:43485791-43659975	Enhancers Strong transcription Weak transcription Flanking Active TSS Bivalent Enhancer Genic enhancers Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	31 gene(s)	inside rSNPs	diseases
39	esv2753431	chr17:43485791-43659975	Weak transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer Genic enhancers Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	31 gene(s)	inside rSNPs	diseases
40	esv2755266	chr17:43485791-43659975	Weak transcription Flanking Active TSS Enhancers Strong transcription Active TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	31 gene(s)	inside rSNPs	diseases
41	esv2755477	chr17:43485791-43659975	Enhancers Strong transcription Weak transcription Bivalent/Poised TSS Active TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	31 gene(s)	inside rSNPs	diseases
42	esv2755480	chr17:43485791-43659975	Weak transcription Strong transcription Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Enhancers Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	31 gene(s)	inside rSNPs	diseases
43	esv2756392	chr17:43485791-43659975	Enhancers Genic enhancers Weak transcription Active TSS Flanking Active TSS Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	31 gene(s)	inside rSNPs	diseases
44	nsv431641	chr17:43485791-43659975	Enhancers Bivalent/Poised TSS Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	31 gene(s)	inside rSNPs	diseases
45	esv35084	chr17:43485791-43666906	Flanking Bivalent TSS/Enh Weak transcription Active TSS Enhancers Bivalent/Poised TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	36 gene(s)	inside rSNPs	diseases
46	esv2754833	chr17:43485791-43666906	Transcr. at gene 5' and 3' Active TSS Flanking Active TSS Bivalent Enhancer Enhancers Weak transcription Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	36 gene(s)	inside rSNPs	diseases
47	nsv431643	chr17:43485791-43666906	Enhancers Bivalent/Poised TSS Strong transcription Active TSS Weak transcription Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	36 gene(s)	inside rSNPs	diseases
48	nsv431642	chr17:43485791-43716885	Strong transcription Active TSS Weak transcription Enhancers Flanking Active TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	41 gene(s)	inside rSNPs	diseases
49	esv3419760	chr17:43504769-43509567	Weak transcription Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Active TSS Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region	9 gene(s)	inside rSNPs	diseases
50	esv3406720	chr17:43505694-43508542	Bivalent Enhancer Flanking Active TSS Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Weak transcription Active TSS Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region	6 gene(s)	inside rSNPs	diseases

mRNA abundance (count:6)

SNP	Gene	Cis/trans	Tissue	Source
rs12939187	MAPK8IP1	trans	lymphoblastoid	RTeQTL
rs12939187	LRRC37A4	cis	multi-tissue	Pritchard
rs12939187	LOC644246	Cis_1M	lymphoblastoid	RTeQTL
rs12939187	LRRC37A4	Cis_1M	lymphoblastoid	RTeQTL
rs12939187	ARHGAP27	Cis_1M	lymphoblastoid	RTeQTL
rs12939187	ARL17	Cis_1M	lymphoblastoid	RTeQTL

Chromatin state (count:110 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr17:43505800-43508400	Bivalent Enhancer	Fetal Thymus	thymus
2	chr17:43506000-43508400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr17:43506000-43508600	Weak transcription	HUVEC	blood vessel
4	chr17:43506000-43510400	Bivalent/Poised TSS	HUES64 Cell Line	embryonic stem cell
5	chr17:43506000-43510600	Bivalent/Poised TSS	ES-I3 Cell Line	embryonic stem cell
6	chr17:43506200-43508400	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
7	chr17:43506200-43508400	Weak transcription	A549	lung
8	chr17:43506200-43508400	Weak transcription	K562	blood
9	chr17:43506200-43508600	Weak transcription	Hela-S3	cervix
10	chr17:43506200-43510400	Bivalent/Poised TSS	HUES48 Cell Line	embryonic stem cell
11	chr17:43506400-43510600	Bivalent/Poised TSS	HUES6 Cell Line	embryonic stem cell
12	chr17:43506600-43508600	Bivalent/Poised TSS	iPS-15b Cell Line	embryonic stem cell
13	chr17:43506600-43508600	Enhancers	Pancreas	Pancrea
14	chr17:43507000-43508400	Enhancers	Primary B cells from cord blood	blood
15	chr17:43507200-43508600	Bivalent/Poised TSS	iPS DF 6.9 Cell Line	embryonic stem cell
16	chr17:43507400-43508400	Enhancers	Gastric	stomach
17	chr17:43507400-43508400	Bivalent Enhancer	Skeletal Muscle Female	skeletal muscle
18	chr17:43507400-43509000	Flanking Bivalent TSS/Enh	HepG2	liver
19	chr17:43507600-43508400	Bivalent/Poised TSS	ES-WA7 Cell Line	embryonic stem cell
20	chr17:43507600-43508400	Bivalent Enhancer	Placenta	Placenta
21	chr17:43507600-43508400	Enhancers	Lung	lung
22	chr17:43507600-43508400	Enhancers	Spleen	Spleen
23	chr17:43507600-43508600	Enhancers	Sigmoid Colon	Sigmoid Colon
24	chr17:43507600-43509200	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
25	chr17:43507800-43508400	Active TSS	Primary T cells from cord blood	blood
26	chr17:43507800-43508400	Enhancers	Primary T helper cells PMA-I stimulated	--
27	chr17:43507800-43508800	Flanking Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
28	chr17:43507800-43508800	Flanking Bivalent TSS/Enh	Colon Smooth Muscle	Colon
29	chr17:43507800-43508800	Flanking Active TSS	GM12878-XiMat	blood
30	chr17:43507800-43509000	Flanking Bivalent TSS/Enh	Duodenum Smooth Muscle	Duodenum
31	chr17:43507800-43509000	Flanking Bivalent TSS/Enh	Fetal Intestine Small	intestine
32	chr17:43507800-43509000	Flanking Active TSS	Rectal Mucosa Donor 29	rectum
33	chr17:43507800-43509200	Flanking Bivalent TSS/Enh	Fetal Intestine Large	intestine
34	chr17:43507800-43510200	Flanking Bivalent TSS/Enh	Stomach Smooth Muscle	stomach
35	chr17:43507800-43510600	Bivalent/Poised TSS	iPS-20b Cell Line	embryonic stem cell
36	chr17:43507800-43510600	Active TSS	Esophagus	oesophagus
37	chr17:43507800-43511000	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
38	chr17:43508000-43508400	Bivalent Enhancer	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
39	chr17:43508000-43508400	Bivalent Enhancer	IMR90 fetal lung fibroblasts Cell Line	lung
40	chr17:43508000-43508400	Enhancers	Primary T killer naive cells fromperipheralblood	blood
41	chr17:43508000-43508400	Bivalent Enhancer	Brain Anterior Caudate	brain
42	chr17:43508000-43508400	Bivalent Enhancer	Fetal Lung	lung
43	chr17:43508000-43508400	Flanking Bivalent TSS/Enh	Fetal Muscle Trunk	muscle
44	chr17:43508000-43508400	Bivalent/Poised TSS	Psoas Muscle	Psoas
45	chr17:43508000-43508400	Bivalent Enhancer	NH-A	brain
46	chr17:43508000-43508400	Bivalent Enhancer	NHDF-Ad	bronchial
47	chr17:43508000-43508600	Bivalent Enhancer	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
48	chr17:43508000-43508600	Flanking Bivalent TSS/Enh	iPS DF 19.11 Cell Line	embryonic stem cell
49	chr17:43508000-43508600	Bivalent Enhancer	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
50	chr17:43508000-43508600	Bivalent Enhancer	Fetal Brain Female	brain

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