The 2.0 version of rSNPBase

Variant report

Variant rs1297620
Chromosome Location chr7:101884396-101884397
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:118 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:101838400-101889400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr7:101846000-101904200 Weak transcription Stomach Mucosa stomach
3 chr7:101852400-101893600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr7:101852800-101897000 Weak transcription NHEK skin
5 chr7:101854400-101894800 Weak transcription K562 blood
6 chr7:101858400-101897600 Weak transcription Psoas Muscle Psoas
7 chr7:101865000-101904200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
8 chr7:101865400-101884600 Weak transcription HUVEC blood vessel
9 chr7:101866000-101892600 Weak transcription Osteobl bone
10 chr7:101866000-101896400 Weak transcription Muscle Satellite Cultured Cells --
11 chr7:101866800-101907600 Weak transcription NH-A brain
12 chr7:101867400-101898000 Strong transcription Primary monocytes fromperipheralblood blood
13 chr7:101867400-101898000 Strong transcription Monocytes-CD14+_RO01746 blood
14 chr7:101867800-101900400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
15 chr7:101868000-101894000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
16 chr7:101869600-101887800 Weak transcription Pancreatic Islets Pancreatic Islet
17 chr7:101870000-101894200 Strong transcription Fetal Thymus thymus
18 chr7:101870200-101898000 Strong transcription Primary neutrophils fromperipheralblood blood
19 chr7:101870400-101895800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
20 chr7:101871200-101884600 Weak transcription Cortex derived primary cultured neurospheres brain
21 chr7:101871800-101891600 Weak transcription Primary T helper naive cells from peripheral blood blood
22 chr7:101872400-101898800 Weak transcription Brain Angular Gyrus brain
23 chr7:101872400-101904000 Weak transcription Brain Cingulate Gyrus brain
24 chr7:101872600-101884400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
25 chr7:101872600-101886800 Strong transcription Thymus Thymus
26 chr7:101872600-101889600 Weak transcription Primary T killer memory cells from peripheral blood blood
27 chr7:101872800-101892000 Weak transcription Small Intestine intestine
28 chr7:101873600-101894600 Weak transcription iPS-15b Cell Line embryonic stem cell
29 chr7:101873600-101904000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
30 chr7:101874800-101886400 Weak transcription Primary hematopoietic stem cells blood
31 chr7:101875200-101886600 Strong transcription Primary mononuclear cells fromperipheralblood Blood
32 chr7:101875600-101894200 Strong transcription Primary hematopoietic stem cells short term culture blood
33 chr7:101875600-101898000 Strong transcription Dnd41 blood
34 chr7:101877600-101895400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
35 chr7:101878000-101894400 Weak transcription ES-I3 Cell Line embryonic stem cell
36 chr7:101878600-101884600 Weak transcription HepG2 liver
37 chr7:101878600-101885800 Weak transcription iPS-18 Cell Line embryonic stem cell
38 chr7:101878600-101893400 Weak transcription Rectal Mucosa Donor 31 rectum
39 chr7:101878600-101895800 Weak transcription HSMMtube muscle
40 chr7:101878600-101896000 Weak transcription HSMM muscle
41 chr7:101878600-101896200 Weak transcription Brain Anterior Caudate brain
42 chr7:101879800-101884600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
43 chr7:101880200-101884600 Strong transcription Fetal Intestine Small intestine
44 chr7:101880400-101884600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
45 chr7:101880400-101884600 Weak transcription Brain Substantia Nigra brain
46 chr7:101880400-101884600 Strong transcription Fetal Intestine Large intestine
47 chr7:101880400-101885200 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
48 chr7:101880400-101886200 Strong transcription Fetal Muscle Leg muscle
49 chr7:101880400-101886400 Strong transcription Fetal Adrenal Gland Adrenal Gland
50 chr7:101880400-101886800 Strong transcription Fetal Muscle Trunk muscle

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Last update: Aug 31, 2015