Variant report

Variant	rs13106406
Chromosome Location	chr4:56408486-56408487
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr4:56407970..56411777-chr4:56498734..56501001,3	K562	blood:
2	chr4:56407880..56411154-chr4:56599779..56601718,3	K562	blood:
3	chr4:56408119..56414507-chr4:56501105..56505595,8	K562	blood:

Variant related genes	Relation type
ENSG00000109255	Chromatin interaction

Extended variants
information (count: 190 )
Associated
traits (count: 5 )

rSNPs within LD-proxies of this variant (count:187)

rs_ID	r²[population]
rs10462032	0.85[AMR][1000 genomes];0.91[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1047354	0.87[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10517344	0.81[AFR][1000 genomes];0.86[AMR][1000 genomes];0.89[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10517346	0.81[AFR][1000 genomes];0.82[AMR][1000 genomes];0.89[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1056545	0.87[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1056547	0.87[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10866425	0.83[AFR][1000 genomes];0.89[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11133378	0.88[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs11133380	0.88[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs11133384	0.81[AFR][1000 genomes];0.82[AMR][1000 genomes];0.89[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11133385	0.94[ASN][1000 genomes]
rs11133386	0.81[AFR][1000 genomes];0.82[AMR][1000 genomes];0.89[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11133387	0.81[AFR][1000 genomes];0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11133388	0.81[AFR][1000 genomes];0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11133389	0.94[ASN][1000 genomes]
rs11133390	0.86[AFR][1000 genomes];0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11133391	0.86[AFR][1000 genomes];0.85[AMR][1000 genomes];0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11133392	0.86[AFR][1000 genomes];0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11133395	0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11133396	0.86[AFR][1000 genomes];0.85[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11133397	0.89[AFR][1000 genomes];0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11133398	0.89[AFR][1000 genomes];0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11133400	0.83[AFR][1000 genomes];0.83[AMR][1000 genomes];0.89[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11722049	0.81[AFR][1000 genomes];0.86[AMR][1000 genomes];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11724094	0.86[AFR][1000 genomes];0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11726198	0.86[AFR][1000 genomes];0.86[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11729220	0.86[AFR][1000 genomes];0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11932293	0.92[AFR][1000 genomes];0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11932712	0.91[ASN][1000 genomes]
rs11932880	0.81[AFR][1000 genomes];0.85[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11934897	0.92[AFR][1000 genomes];0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11935823	0.81[AFR][1000 genomes];0.90[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs11937487	0.87[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs11939580	0.85[AFR][1000 genomes];0.95[ASN][1000 genomes]
rs11939652	0.88[ASN][1000 genomes]
rs11942472	0.83[AFR][1000 genomes];0.84[AMR][1000 genomes];0.89[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11943206	0.89[AFR][1000 genomes];0.94[ASN][1000 genomes]
rs11945370	0.88[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12500162	0.86[AFR][1000 genomes];0.86[AMR][1000 genomes];0.93[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12500456	0.89[AFR][1000 genomes];0.94[ASN][1000 genomes]
rs12500601	0.92[ASN][1000 genomes]
rs12500852	0.83[AFR][1000 genomes];0.83[AMR][1000 genomes];0.89[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12501327	0.86[AFR][1000 genomes];0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12501636	0.81[AFR][1000 genomes];0.86[AMR][1000 genomes];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12501746	0.90[ASN][1000 genomes]
rs12503578	0.86[AFR][1000 genomes];0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12504300	0.93[ASN][1000 genomes]
rs12504632	0.90[AFR][1000 genomes];0.92[ASN][1000 genomes]
rs12505266	0.85[AMR][1000 genomes];0.90[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12506788	0.81[AFR][1000 genomes];0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12507722	0.88[AFR][1000 genomes];0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12508367	0.85[AFR][1000 genomes];0.95[ASN][1000 genomes]
rs12510110	0.88[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12510275	0.85[AFR][1000 genomes];0.95[ASN][1000 genomes]
rs12510327	0.85[AFR][1000 genomes];0.95[ASN][1000 genomes]
rs12510400	0.81[AFR][1000 genomes];0.84[ASN][1000 genomes]
rs12510681	0.86[AFR][1000 genomes];0.85[AMR][1000 genomes];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12510990	0.88[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12512737	0.93[ASN][1000 genomes]
rs12642716	0.81[AFR][1000 genomes];0.86[AMR][1000 genomes];0.92[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12644948	0.81[AFR][1000 genomes];0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12647677	0.82[AMR][1000 genomes];0.88[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12648271	0.94[ASN][1000 genomes]
rs12649507	0.85[AFR][1000 genomes];0.95[ASN][1000 genomes]
rs12651640	0.82[AMR][1000 genomes];0.89[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs13107810	0.90[AFR][1000 genomes];0.96[ASN][1000 genomes]
rs13107988	0.81[AFR][1000 genomes];0.86[AMR][1000 genomes];0.92[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs13108409	0.80[AFR][1000 genomes];0.86[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs13108499	0.86[AFR][1000 genomes];0.86[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs13111128	0.81[AFR][1000 genomes];0.83[ASN][1000 genomes]
rs13113518	0.85[AFR][1000 genomes];0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs13114841	0.81[AFR][1000 genomes];0.86[AMR][1000 genomes];0.92[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs13115570	0.84[AFR][1000 genomes];0.95[ASN][1000 genomes]
rs13115828	0.92[AFR][1000 genomes];0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs13116035	0.80[AFR][1000 genomes];0.94[ASN][1000 genomes]
rs13116194	0.88[AFR][1000 genomes];0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs13117836	0.90[AFR][1000 genomes];0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs13118237	0.81[AFR][1000 genomes];0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs13118520	0.92[AFR][1000 genomes];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs13122619	0.81[AFR][1000 genomes];0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs13124436	0.85[AFR][1000 genomes];0.94[ASN][1000 genomes]
rs13125984	0.93[ASN][1000 genomes]
rs13127906	0.84[AFR][1000 genomes];0.83[AMR][1000 genomes];0.90[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs13128179	0.89[ASN][1000 genomes]
rs13132084	0.89[AFR][1000 genomes];0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs13132420	0.86[AFR][1000 genomes];0.86[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs13133484	0.82[AFR][1000 genomes];0.91[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs13133579	0.81[AFR][1000 genomes];0.82[AMR][1000 genomes];0.91[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs13136282	0.92[AFR][1000 genomes];0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs13138241	0.94[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs13140173	0.85[AFR][1000 genomes];0.95[ASN][1000 genomes]
rs13140590	0.86[AFR][1000 genomes];0.94[ASN][1000 genomes]
rs13141049	0.89[AFR][1000 genomes];0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs13142096	0.94[ASN][1000 genomes]
rs13144598	0.90[AFR][1000 genomes];0.87[AMR][1000 genomes];0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs13146987	0.81[AFR][1000 genomes];0.86[AMR][1000 genomes];0.93[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs13152173	0.89[AFR][1000 genomes];0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1464490	0.81[AFR][1000 genomes];0.82[AMR][1000 genomes];0.89[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1474271	0.87[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs1522112	0.81[AFR][1000 genomes];0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1522114	0.94[ASN][1000 genomes]
rs1554483	0.81[AFR][1000 genomes];0.82[AMR][1000 genomes];0.89[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1554484	0.81[AFR][1000 genomes];0.91[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1586555	0.81[AFR][1000 genomes];0.84[ASN][1000 genomes]
rs2035691	0.85[AFR][1000 genomes];0.95[ASN][1000 genomes]
rs2035692	0.85[AFR][1000 genomes];0.95[ASN][1000 genomes]
rs2171618	0.89[AFR][1000 genomes];0.93[ASN][1000 genomes]
rs2272073	0.85[AFR][1000 genomes];0.95[ASN][1000 genomes]
rs2279458	0.90[AFR][1000 genomes];0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2412648	0.93[ASN][1000 genomes]
rs34534635	0.80[AFR][1000 genomes];0.84[ASN][1000 genomes]
rs34648901	0.89[AFR][1000 genomes];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs34658078	0.88[AFR][1000 genomes];0.89[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs3749474	0.87[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs3762837	0.86[AFR][1000 genomes];0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs3805146	0.87[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs3805148	0.88[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs3805149	0.88[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs3805150	0.82[AMR][1000 genomes];0.86[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs3805151	0.81[AFR][1000 genomes];0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs3805153	0.94[ASN][1000 genomes]
rs3805155	0.86[AFR][1000 genomes];0.86[AMR][1000 genomes];0.93[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs3828480	0.86[AFR][1000 genomes];0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs3828482	0.86[AFR][1000 genomes];0.84[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4256282	0.88[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs4340844	0.84[AMR][1000 genomes];0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4507426	0.85[AFR][1000 genomes];0.95[ASN][1000 genomes]
rs4864542	0.81[AFR][1000 genomes];0.86[AMR][1000 genomes];0.92[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4864543	0.94[ASN][1000 genomes]
rs4864544	0.86[AFR][1000 genomes];0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4864545	0.85[AFR][1000 genomes];0.84[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4864546	0.84[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4864547	0.89[AFR][1000 genomes];0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4864548	0.92[AFR][1000 genomes];0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4864549	0.90[AFR][1000 genomes];0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4864990	0.82[AMR][1000 genomes];0.87[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4864993	0.82[AMR][1000 genomes];0.89[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4864994	0.81[AFR][1000 genomes];0.82[AMR][1000 genomes];0.89[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4864995	0.81[AFR][1000 genomes];0.82[AMR][1000 genomes];0.89[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4864996	0.93[ASN][1000 genomes]
rs4864997	0.81[AFR][1000 genomes];0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4864999	0.81[AFR][1000 genomes];0.82[AMR][1000 genomes];0.91[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4865001	0.94[ASN][1000 genomes]
rs4865003	0.85[AFR][1000 genomes];0.95[ASN][1000 genomes]
rs4865004	0.86[AFR][1000 genomes];0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4865005	0.86[AFR][1000 genomes];0.81[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4865007	0.89[AFR][1000 genomes];0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4865011	0.92[AFR][1000 genomes];0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4865013	0.90[AFR][1000 genomes];0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs55699500	0.89[AFR][1000 genomes];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs56055342	0.88[AFR][1000 genomes];0.96[ASN][1000 genomes]
rs56154935	0.90[AFR][1000 genomes];0.84[AMR][1000 genomes];0.99[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs56362210	0.89[AFR][1000 genomes];0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs5863	0.87[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs6822740	0.86[AFR][1000 genomes];0.86[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6825774	0.94[ASN][1000 genomes]
rs6828570	0.87[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6830409	0.85[AFR][1000 genomes];0.95[ASN][1000 genomes]
rs6838305	0.86[AFR][1000 genomes];0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6838499	0.81[AFR][1000 genomes];0.89[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs6838882	0.81[AFR][1000 genomes];0.86[AMR][1000 genomes];0.92[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6843722	0.95[ASN][1000 genomes]
rs6843997	0.85[AFR][1000 genomes];0.95[ASN][1000 genomes]
rs6847529	0.86[AFR][1000 genomes];0.86[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6849433	0.86[AFR][1000 genomes];0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6849474	0.93[ASN][1000 genomes]
rs6858803	0.81[AFR][1000 genomes];0.86[AMR][1000 genomes];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7658446	0.94[ASN][1000 genomes]
rs7660517	0.87[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7660980	0.89[AFR][1000 genomes];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7662966	0.92[AFR][1000 genomes];0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7667741	0.88[AFR][1000 genomes];0.96[ASN][1000 genomes]
rs7668429	0.88[AFR][1000 genomes];0.87[AMR][1000 genomes];0.95[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7669635	0.89[AFR][1000 genomes];0.85[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7675109	0.86[AFR][1000 genomes];0.86[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7677085	0.81[AFR][1000 genomes];0.86[AMR][1000 genomes];0.93[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7677952	0.87[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7686058	0.89[AFR][1000 genomes];0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7686261	0.86[AFR][1000 genomes];0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7690837	0.81[AFR][1000 genomes];0.84[ASN][1000 genomes]
rs7691799	0.88[AFR][1000 genomes];0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7696832	0.89[AFR][1000 genomes];0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7699867	0.93[ASN][1000 genomes]
rs9312661	0.81[AFR][1000 genomes];0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs939823	0.81[AFR][1000 genomes];0.86[AMR][1000 genomes];0.92[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs960152	0.81[AFR][1000 genomes];0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs9790523	0.84[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3328582	chr4:56164136-56486156	Enhancers Active TSS Weak transcription Genic enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	30 gene(s)	inside rSNPs	diseases
2	esv2755990	chr4:56317136-57143037	Strong transcription Weak transcription Flanking Bivalent TSS/Enh Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	40 gene(s)	inside rSNPs	diseases
3	nsv10496	chr4:56336946-56841137	Flanking Active TSS Weak transcription Enhancers Active TSS Bivalent/Poised TSS Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	35 gene(s)	inside rSNPs	diseases

mRNA abundance (count:5)

SNP	Gene	Cis/trans	Tissue	Source
rs13106406	TMEM165	cis	Nerve Tibial	GTEx
rs13106406	SRD5A3	cis	Esophagus Mucosa	GTEx
rs13106406	SRD5A3	cis	Whole Blood	GTEx
rs13106406	SRD5A3-AS1	cis	Thyroid	GTEx
rs13106406	SRD5A3-AS1	cis	Esophagus Mucosa	GTEx

Chromatin state (count:85 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:56361600-56411800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr4:56391600-56408800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
3	chr4:56391600-56409400	Weak transcription	NHDF-Ad	bronchial
4	chr4:56391800-56409400	Weak transcription	HMEC	breast
5	chr4:56391800-56409400	Weak transcription	NHEK	skin
6	chr4:56391800-56409600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
7	chr4:56396800-56411600	Weak transcription	Psoas Muscle	Psoas
8	chr4:56399600-56411600	Weak transcription	Left Ventricle	heart
9	chr4:56399800-56411000	Weak transcription	Brain Substantia Nigra	brain
10	chr4:56400000-56410200	Weak transcription	Fetal Intestine Small	intestine
11	chr4:56400800-56409600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
12	chr4:56401000-56409400	Weak transcription	HSMM	muscle
13	chr4:56401000-56409600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
14	chr4:56401000-56411400	Weak transcription	Primary B cells from peripheral blood	blood
15	chr4:56401200-56410000	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
16	chr4:56401200-56411800	Weak transcription	Sigmoid Colon	Sigmoid Colon
17	chr4:56401600-56410200	Weak transcription	Primary hematopoietic stem cells short term culture	blood
18	chr4:56402400-56409400	Weak transcription	Fetal Heart	heart
19	chr4:56402800-56409600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
20	chr4:56402800-56410600	Weak transcription	Primary hematopoietic stem cells	blood
21	chr4:56402800-56411600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
22	chr4:56403000-56411400	Weak transcription	Fetal Muscle Leg	muscle
23	chr4:56403800-56410400	Weak transcription	Fetal Stomach	stomach
24	chr4:56403800-56411800	Weak transcription	Lung	lung
25	chr4:56404200-56409400	Weak transcription	Skeletal Muscle Female	skeletal muscle
26	chr4:56404600-56410200	Weak transcription	Fetal Lung	lung
27	chr4:56405000-56408800	Weak transcription	H9 Cell Line	embryonic stem cell
28	chr4:56405000-56410000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
29	chr4:56405000-56411000	Weak transcription	Fetal Kidney	kidney
30	chr4:56405000-56411400	Weak transcription	Fetal Muscle Trunk	muscle
31	chr4:56405200-56410000	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
32	chr4:56405200-56410800	Weak transcription	Monocytes-CD14+_RO01746	blood
33	chr4:56405400-56410000	Weak transcription	HepG2	liver
34	chr4:56405600-56409400	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
35	chr4:56405600-56409400	Weak transcription	Adipose Nuclei	Adipose
36	chr4:56405600-56410200	Weak transcription	Hela-S3	cervix
37	chr4:56405600-56410400	Weak transcription	Primary T helper cells fromperipheralblood	blood
38	chr4:56405600-56411400	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
39	chr4:56405600-56411400	Weak transcription	Fetal Thymus	thymus
40	chr4:56405800-56408800	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
41	chr4:56405800-56409400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
42	chr4:56405800-56410000	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
43	chr4:56405800-56410200	Weak transcription	Duodenum Smooth Muscle	Duodenum
44	chr4:56405800-56410400	Weak transcription	Primary T helper cells PMA-I stimulated	--
45	chr4:56405800-56410800	Weak transcription	Primary T helper naive cells from peripheral blood	blood
46	chr4:56405800-56411200	Weak transcription	Primary T cells fromperipheralblood	blood
47	chr4:56406000-56409600	Weak transcription	Liver	Liver
48	chr4:56406000-56410400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
49	chr4:56406200-56408800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
50	chr4:56406200-56408800	Weak transcription	Osteobl	bone

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