Variant report

Variant	rs13116385
Chromosome Location	chr4:103373286-103373287
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs13129951	0.83[CEU][hapmap];0.82[MEX][hapmap];0.87[TSI][hapmap]
rs13140033	0.92[CEU][hapmap];1.00[YRI][hapmap]
rs6846971	0.90[ASW][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv521275	chr4:103373286-103373464	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:103369400-103373400	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
2	chr4:103372400-103376000	Weak transcription	Fetal Lung	lung
3	chr4:103373200-103373800	Enhancers	Primary T helper cells PMA-I stimulated	--

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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