Variant report

Variant	rs13202635
Chromosome Location	chr6:56162471-56162472
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs11757528	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4365929	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4529301	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4712123	0.99[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4715607	0.99[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4715609	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7773611	0.93[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs9349812	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:56157600-56162600	Weak transcription	Colon Smooth Muscle	Colon
2	chr6:56161200-56163600	Enhancers	Hela-S3	cervix
3	chr6:56161400-56163200	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
4	chr6:56161600-56162800	Enhancers	NHEK	skin
5	chr6:56161600-56163000	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
6	chr6:56161600-56163000	Enhancers	HMEC	breast
7	chr6:56161800-56163200	Enhancers	Muscle Satellite Cultured Cells	--
8	chr6:56162000-56162800	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
9	chr6:56162000-56163400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
10	chr6:56162000-56163400	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
11	chr6:56162000-56164000	Enhancers	Rectal Smooth Muscle	rectum
12	chr6:56162200-56162800	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
13	chr6:56162200-56162800	Enhancers	HSMMtube	muscle
14	chr6:56162200-56163400	Enhancers	HSMM	muscle
15	chr6:56162200-56165600	Enhancers	HUVEC	blood vessel
16	chr6:56162400-56162800	Enhancers	Osteobl	bone

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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