Variant report

Variant	rs13205734
Chromosome Location	chr6:75168225-75168226
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs12525586	0.92[AFR][1000 genomes]
rs13193052	0.81[ASN][1000 genomes]
rs6453754	0.80[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs67813921	0.81[ASN][1000 genomes]
rs6932157	0.83[EUR][1000 genomes]
rs6937677	0.82[EUR][1000 genomes]
rs73757818	0.80[AFR][1000 genomes]
rs73757819	0.90[AFR][1000 genomes]
rs7744739	0.81[ASN][1000 genomes]
rs9343166	0.80[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs9343171	0.84[EUR][1000 genomes]
rs9352119	0.80[AMR][1000 genomes];0.83[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv886167	chr6:75102625-75175449	Enhancers Weak transcription Active TSS	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:75165600-75168400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
2	chr6:75167800-75168800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
3	chr6:75167800-75168800	Weak transcription	Gastric	stomach

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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