Variant report

Variant rs13230247
Chromosome Location chr7:6680235-6680236
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:6678000-6680600 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin01 Skin
2 chr7:6678000-6691600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr7:6678200-6680400 Weak transcription Sigmoid Colon Sigmoid Colon
4 chr7:6678200-6680400 Weak transcription NH-A brain
5 chr7:6678200-6680600 Weak transcription Rectal Mucosa Donor 31 rectum
6 chr7:6678200-6680600 Weak transcription HSMMtube muscle
7 chr7:6678200-6681000 Weak transcription H1 Cell Line embryonic stem cell
8 chr7:6678200-6681000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
9 chr7:6678200-6681000 Weak transcription Placenta Amnion Placenta Amnion
10 chr7:6678200-6681200 Weak transcription H9 Cell Line embryonic stem cell
11 chr7:6678200-6681600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
12 chr7:6678200-6681600 Weak transcription Fetal Kidney kidney
13 chr7:6678200-6682400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
14 chr7:6678200-6683200 Weak transcription HUES48 Cell Line embryonic stem cell
15 chr7:6678200-6683400 Weak transcription Pancreatic Islets Pancreatic Islet
16 chr7:6678200-6683800 Weak transcription iPS-20b Cell Line embryonic stem cell
17 chr7:6678200-6684200 Weak transcription HUES64 Cell Line embryonic stem cell
18 chr7:6678200-6685000 Strong transcription NHEK skin
19 chr7:6678200-6698200 Weak transcription ES-I3 Cell Line embryonic stem cell
20 chr7:6678400-6680400 Weak transcription Ovary ovary
21 chr7:6678400-6680400 Weak transcription Rectal Mucosa Donor 29 rectum
22 chr7:6678400-6681000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
23 chr7:6678400-6681000 Weak transcription Aorta Aorta
24 chr7:6678400-6681200 Weak transcription Primary T helper naive cells from peripheral blood blood
25 chr7:6678400-6683000 Weak transcription Small Intestine intestine
26 chr7:6678400-6691600 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
27 chr7:6678400-6691600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
28 chr7:6678600-6680400 Weak transcription Brain Cingulate Gyrus brain
29 chr7:6678600-6680600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
30 chr7:6678600-6680600 Weak transcription Duodenum Smooth Muscle Duodenum
31 chr7:6678600-6681200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
32 chr7:6678600-6681200 Weak transcription Brain Angular Gyrus brain
33 chr7:6678600-6681600 Weak transcription HUVEC blood vessel
34 chr7:6678600-6682800 Weak transcription Stomach Mucosa stomach
35 chr7:6678600-6687800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
36 chr7:6678600-6687800 Strong transcription Fetal Intestine Large intestine
37 chr7:6678600-6689600 Strong transcription Fetal Intestine Small intestine
38 chr7:6678800-6680400 Genic enhancers Primary Natural Killer cells fromperipheralblood blood
39 chr7:6678800-6680600 Weak transcription Brain Anterior Caudate brain
40 chr7:6678800-6680600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
41 chr7:6678800-6680600 Weak transcription Colon Smooth Muscle Colon
42 chr7:6678800-6680800 Genic enhancers Dnd41 blood
43 chr7:6678800-6681400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
44 chr7:6678800-6681400 Strong transcription HSMM muscle
45 chr7:6678800-6681600 Genic enhancers Breast Myoepithelial Primary Cells Breast
46 chr7:6678800-6682000 Weak transcription Psoas Muscle Psoas
47 chr7:6678800-6685600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
48 chr7:6678800-6688600 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
49 chr7:6678800-6689600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
50 chr7:6678800-6691200 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin

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