Variant report

Variant	rs13270022
Chromosome Location	chr8:110200100-110200101
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 157 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:155)

rs_ID	r²[population]
rs10081564	0.83[ASN][1000 genomes]
rs10088496	0.86[ASN][1000 genomes]
rs10089544	0.86[ASN][1000 genomes]
rs10091155	0.84[ASN][1000 genomes]
rs10100690	0.83[ASN][1000 genomes]
rs10101048	0.86[ASN][1000 genomes]
rs10101050	0.86[ASN][1000 genomes]
rs10101189	0.86[ASN][1000 genomes]
rs10101520	0.86[ASN][1000 genomes]
rs10464819	0.80[ASN][1000 genomes]
rs10464848	0.80[ASN][1000 genomes]
rs10464849	0.80[ASN][1000 genomes]
rs10955508	0.86[ASN][1000 genomes]
rs10955510	0.86[ASN][1000 genomes]
rs10955511	0.84[ASN][1000 genomes]
rs10955512	0.86[ASN][1000 genomes]
rs10955513	0.84[ASN][1000 genomes]
rs10955514	0.80[ASN][1000 genomes]
rs11775991	0.86[ASN][1000 genomes]
rs11785243	0.86[ASN][1000 genomes]
rs11985765	0.84[ASN][1000 genomes]
rs11986161	0.86[ASN][1000 genomes]
rs11992816	0.84[ASN][1000 genomes]
rs11994164	0.86[ASN][1000 genomes]
rs11994227	0.86[ASN][1000 genomes]
rs11995419	0.84[ASN][1000 genomes]
rs11997974	0.86[ASN][1000 genomes]
rs12542811	0.86[ASN][1000 genomes]
rs12542959	0.86[ASN][1000 genomes]
rs12544150	0.86[ASN][1000 genomes]
rs12544503	0.86[ASN][1000 genomes]
rs12546985	0.80[ASN][1000 genomes]
rs12549347	0.86[ASN][1000 genomes]
rs12549397	0.86[ASN][1000 genomes]
rs12550383	0.86[ASN][1000 genomes]
rs12674513	0.80[ASN][1000 genomes]
rs12674533	0.80[ASN][1000 genomes]
rs12675753	0.86[ASN][1000 genomes]
rs12679958	0.83[ASN][1000 genomes]
rs12680451	0.84[ASN][1000 genomes]
rs12680886	0.83[ASN][1000 genomes]
rs12682610	0.84[ASN][1000 genomes]
rs13251321	0.83[ASN][1000 genomes]
rs13251597	0.84[ASN][1000 genomes]
rs13265151	0.86[ASN][1000 genomes]
rs13269698	0.91[AMR][1000 genomes];0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs13282488	0.86[ASN][1000 genomes]
rs1380098	0.80[ASN][1000 genomes]
rs1380099	0.83[ASN][1000 genomes]
rs1458921	0.80[ASN][1000 genomes]
rs1458924	0.80[ASN][1000 genomes]
rs1458925	0.80[ASN][1000 genomes]
rs1548082	0.80[ASN][1000 genomes]
rs1548083	0.80[ASN][1000 genomes]
rs1585295	0.84[ASN][1000 genomes]
rs17364037	0.80[ASN][1000 genomes]
rs1947630	0.80[ASN][1000 genomes]
rs1947631	0.80[ASN][1000 genomes]
rs2007179	0.83[ASN][1000 genomes]
rs2054255	0.80[ASN][1000 genomes]
rs2067780	0.80[ASN][1000 genomes]
rs2125512	0.82[ASN][1000 genomes]
rs2168965	0.82[ASN][1000 genomes]
rs28407429	0.84[ASN][1000 genomes]
rs28413119	0.86[ASN][1000 genomes]
rs28437828	0.86[ASN][1000 genomes]
rs2882176	0.80[ASN][1000 genomes]
rs28870477	0.80[ASN][1000 genomes]
rs2926198	0.80[ASN][1000 genomes]
rs2926202	0.80[ASN][1000 genomes]
rs2926203	0.80[ASN][1000 genomes]
rs2926204	0.80[ASN][1000 genomes]
rs2926207	0.91[AMR][1000 genomes];0.90[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2926209	0.80[ASN][1000 genomes]
rs2926213	0.80[ASN][1000 genomes]
rs2926216	0.80[ASN][1000 genomes]
rs2926217	0.80[ASN][1000 genomes]
rs2926218	0.81[ASN][1000 genomes]
rs2926220	0.80[ASN][1000 genomes]
rs2926223	0.80[ASN][1000 genomes]
rs2926279	0.85[AMR][1000 genomes];0.81[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2980587	0.80[ASN][1000 genomes]
rs2980588	0.80[ASN][1000 genomes]
rs2980590	0.80[ASN][1000 genomes]
rs2980592	0.80[ASN][1000 genomes]
rs2980595	0.80[ASN][1000 genomes]
rs2980596	0.80[ASN][1000 genomes]
rs2980597	0.88[AMR][1000 genomes];0.86[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2980598	0.80[ASN][1000 genomes]
rs2980599	0.80[ASN][1000 genomes]
rs2980601	0.80[ASN][1000 genomes]
rs2980603	0.80[ASN][1000 genomes]
rs2980604	0.80[ASN][1000 genomes]
rs2980609	0.80[ASN][1000 genomes]
rs2980635	0.80[ASN][1000 genomes]
rs3134471	0.91[AMR][1000 genomes];0.86[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs34049275	0.84[ASN][1000 genomes]
rs35850605	0.84[ASN][1000 genomes]
rs35978837	0.86[ASN][1000 genomes]
rs3890699	0.84[ASN][1000 genomes]
rs4130640	0.84[ASN][1000 genomes]
rs4236803	0.84[ASN][1000 genomes]
rs4236804	0.84[ASN][1000 genomes]
rs4257986	0.84[ASN][1000 genomes]
rs4265160	0.84[ASN][1000 genomes]
rs4273834	0.80[ASN][1000 genomes]
rs4288351	0.84[ASN][1000 genomes]
rs4291240	0.87[ASN][1000 genomes]
rs4311632	0.84[ASN][1000 genomes]
rs4332104	0.84[ASN][1000 genomes]
rs4339614	0.84[ASN][1000 genomes]
rs4358779	0.86[ASN][1000 genomes]
rs4389899	0.86[ASN][1000 genomes]
rs4389900	0.84[ASN][1000 genomes]
rs4428648	0.86[ASN][1000 genomes]
rs4439099	0.86[ASN][1000 genomes]
rs4442117	0.86[ASN][1000 genomes]
rs4443632	0.86[ASN][1000 genomes]
rs4454252	0.84[ASN][1000 genomes]
rs4529440	0.86[ASN][1000 genomes]
rs4570131	0.84[ASN][1000 genomes]
rs4604407	0.80[ASN][1000 genomes]
rs4645539	0.86[ASN][1000 genomes]
rs4734196	0.86[ASN][1000 genomes]
rs4734197	0.86[ASN][1000 genomes]
rs4734198	0.86[ASN][1000 genomes]
rs4734203	0.84[ASN][1000 genomes]
rs4734204	0.84[ASN][1000 genomes]
rs4734210	0.80[ASN][1000 genomes]
rs4735108	0.86[ASN][1000 genomes]
rs4735109	0.86[ASN][1000 genomes]
rs4735110	0.86[ASN][1000 genomes]
rs4735114	0.84[ASN][1000 genomes]
rs4735116	0.83[ASN][1000 genomes]
rs4735118	0.82[ASN][1000 genomes]
rs4735122	0.80[ASN][1000 genomes]
rs55765942	0.80[ASN][1000 genomes]
rs56896876	0.86[ASN][1000 genomes]
rs62511091	0.84[ASN][1000 genomes]
rs6469245	0.83[ASN][1000 genomes]
rs6983376	0.84[ASN][1000 genomes]
rs6985869	0.85[ASN][1000 genomes]
rs6986127	0.84[ASN][1000 genomes]
rs6990140	0.86[ASN][1000 genomes]
rs6994788	0.83[ASN][1000 genomes]
rs6998731	0.84[ASN][1000 genomes]
rs6998883	0.84[ASN][1000 genomes]
rs7004206	0.80[ASN][1000 genomes]
rs7010380	0.86[ASN][1000 genomes]
rs71526729	0.91[AMR][1000 genomes];0.86[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7817746	0.84[ASN][1000 genomes]
rs7817909	0.84[ASN][1000 genomes]
rs7825689	0.86[ASN][1000 genomes]
rs7845815	0.86[ASN][1000 genomes]
rs922044	0.83[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1023204	chr8:110169573-110303085	Strong transcription Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS Genic enhancers Active TSS	Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv1031663	chr8:110177432-110303085	Weak transcription Genic enhancers Strong transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS	Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:110191400-110237400	Weak transcription	Left Ventricle	heart
2	chr8:110192200-110202400	Weak transcription	iPS-18 Cell Line	embryonic stem cell
3	chr8:110192400-110202000	Weak transcription	ES-WA7 Cell Line	embryonic stem cell

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