Variant report

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs1327462	0.89[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs1409979	0.95[AFR][1000 genomes];0.84[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs1409980	0.84[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs1409986	1.00[CEU][hapmap];0.85[EUR][1000 genomes]
rs1414069	0.85[CEU][hapmap];0.81[EUR][1000 genomes]
rs1576055	1.00[CEU][hapmap]
rs1591385	0.85[CEU][hapmap];0.93[EUR][1000 genomes]
rs1854149	0.92[AFR][1000 genomes];0.91[EUR][1000 genomes]
rs2209747	0.97[AFR][1000 genomes];0.84[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs2225110	0.92[AFR][1000 genomes];0.96[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs2257713	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs2258725	0.92[AFR][1000 genomes];0.80[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs2782785	0.90[EUR][1000 genomes]
rs3120156	0.90[EUR][1000 genomes]
rs3131375	0.85[CEU][hapmap];1.00[YRI][hapmap];0.86[AFR][1000 genomes];0.90[EUR][1000 genomes]
rs4650092	1.00[CEU][hapmap]
rs6424405	0.85[CEU][hapmap]
rs6424406	1.00[CEU][hapmap];0.93[EUR][1000 genomes]
rs7515193	0.94[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs7525012	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs7551638	0.92[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1845198	chr1:71274759-71514969	Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Enhancers Weak transcription Active TSS Genic enhancers Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:71283400-71286200	Enhancers	Fetal Heart	heart
2	chr1:71283600-71285200	Enhancers	NHDF-Ad	bronchial
3	chr1:71283600-71286200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
4	chr1:71283800-71285000	Enhancers	Monocytes-CD14+_RO01746	blood
5	chr1:71283800-71285200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
6	chr1:71283800-71285200	Enhancers	Primary monocytes fromperipheralblood	blood
7	chr1:71284600-71285600	Weak transcription	Primary hematopoietic stem cells short term culture	blood

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