Variant report

Variant rs1329380
Chromosome Location chr9:531396-531397
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:47 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:507000-532600 Weak transcription ES-I3 Cell Line embryonic stem cell
2 chr9:514000-532200 Weak transcription Fetal Muscle Trunk muscle
3 chr9:520600-535000 Weak transcription Gastric stomach
4 chr9:521400-533000 Weak transcription Small Intestine intestine
5 chr9:522800-532600 Weak transcription Fetal Kidney kidney
6 chr9:523200-532800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
7 chr9:523800-533600 Weak transcription Esophagus oesophagus
8 chr9:523800-535000 Weak transcription Lung lung
9 chr9:524600-531800 Weak transcription Fetal Lung lung
10 chr9:525400-532400 Weak transcription Rectal Mucosa Donor 31 rectum
11 chr9:526400-535000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
12 chr9:527400-532400 Weak transcription Fetal Intestine Large intestine
13 chr9:527600-534800 Weak transcription Psoas Muscle Psoas
14 chr9:527600-535000 Weak transcription Sigmoid Colon Sigmoid Colon
15 chr9:528000-537400 Weak transcription Primary T killer memory cells from peripheral blood blood
16 chr9:528800-532000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
17 chr9:529200-531600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
18 chr9:529400-531400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
19 chr9:529400-531600 Enhancers NHEK skin
20 chr9:529400-532600 Weak transcription Fetal Intestine Small intestine
21 chr9:529600-531400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
22 chr9:529600-531600 Enhancers HMEC breast
23 chr9:529600-533400 Enhancers A549 lung
24 chr9:529800-531400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
25 chr9:529800-533600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
26 chr9:530000-532000 Weak transcription Fetal Heart heart
27 chr9:530000-535000 Weak transcription Ovary ovary
28 chr9:530200-533000 Weak transcription Duodenum Smooth Muscle Duodenum
29 chr9:530600-531400 Enhancers Left Ventricle heart
30 chr9:530600-534600 Enhancers Brain Hippocampus Middle brain
31 chr9:530600-535200 Enhancers Brain Cingulate Gyrus brain
32 chr9:530800-531400 Weak transcription Skeletal Muscle Female skeletal muscle
33 chr9:530800-531400 Enhancers Stomach Smooth Muscle stomach
34 chr9:530800-532000 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
35 chr9:530800-532000 Enhancers Pancreas Pancrea
36 chr9:530800-532000 Enhancers Right Atrium heart
37 chr9:530800-532800 Weak transcription Colon Smooth Muscle Colon
38 chr9:530800-535200 Enhancers Brain Inferior Temporal Lobe brain
39 chr9:530800-538400 Enhancers Breast Myoepithelial Primary Cells Breast
40 chr9:531200-531400 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
41 chr9:531200-531400 Enhancers Fetal Muscle Leg muscle
42 chr9:531200-531800 Enhancers Cortex derived primary cultured neurospheres brain
43 chr9:531200-532000 Enhancers H1 Cell Line embryonic stem cell
44 chr9:531200-532000 Enhancers Aorta Aorta
45 chr9:531200-532000 Enhancers Right Ventricle heart
46 chr9:531200-534800 Enhancers Brain Substantia Nigra brain
47 chr9:531200-538000 Enhancers Brain Anterior Caudate brain

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