Variant report

Variant rs13298596
Chromosome Location chr9:670666-670667
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:31 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:653400-698000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr9:656400-673800 Weak transcription Stomach Smooth Muscle stomach
3 chr9:656800-673800 Weak transcription Psoas Muscle Psoas
4 chr9:657800-672000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
5 chr9:657800-673200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
6 chr9:658400-672000 Weak transcription Colon Smooth Muscle Colon
7 chr9:664000-673600 Weak transcription A549 lung
8 chr9:664200-673800 Weak transcription Fetal Heart heart
9 chr9:669600-672000 Weak transcription Brain Cingulate Gyrus brain
10 chr9:670000-672200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
11 chr9:670200-670800 Enhancers HepG2 liver
12 chr9:670200-670800 Enhancers NHEK skin
13 chr9:670200-671000 Enhancers iPS-20b Cell Line embryonic stem cell
14 chr9:670400-670800 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
15 chr9:670400-670800 Enhancers HUES64 Cell Line embryonic stem cell
16 chr9:670400-670800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
17 chr9:670400-670800 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
18 chr9:670400-670800 Enhancers Esophagus oesophagus
19 chr9:670400-670800 ZNF genes & repeats Fetal Intestine Small intestine
20 chr9:670400-670800 ZNF genes & repeats Left Ventricle heart
21 chr9:670400-670800 Enhancers Right Ventricle heart
22 chr9:670400-672000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
23 chr9:670600-670800 Enhancers ES-I3 Cell Line embryonic stem cell
24 chr9:670600-670800 Enhancers H1 Cell Line embryonic stem cell
25 chr9:670600-670800 Genic enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
26 chr9:670600-670800 Enhancers H9 Cell Line embryonic stem cell
27 chr9:670600-670800 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
28 chr9:670600-670800 Enhancers Gastric stomach
29 chr9:670600-670800 ZNF genes & repeats Rectal Mucosa Donor 29 rectum
30 chr9:670600-672000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
31 chr9:670600-673600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell

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